VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 0.29 30.3 1.00 At2g40610 818656 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.50 65.3 0.69 At1g29450 839821 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.46 59.8 0.72 At1g29430 839819 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.43 55.3 0.72 At1g29500 839827 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:nucleolus, nucleus;P O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.40 50.8 0.69 At1g29510 839828 SAUR68 (SMALL AUXIN UPREGULATED 68) F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.27 26.2 0.69 At4g16515 827350 unknown protein F:molecular_function unknown;P:unknown;C:endomembrane system;P O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.25 22.6 0.71 At1g20190 838608 ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.17 10.2 0.71 At5g48900 834948 pectate lyase family protein F:lyase activity, pectate lyase activity;P:unknown;C:endomembrane system;PBFO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.09 2.8 0.72 At2g42900 818891 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 291.5 100.0 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 107.1 99.9 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 55.6 99.8 E-ATMX-35-raw-cel-1574334816 47.5 99.8 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 46.6 99.8 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 45.4 99.8 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 42.5 99.8 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 41.8 99.8 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 41.2 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 39.1 99.8 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 38.7 99.8 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 38.4 99.8 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 38.2 99.8 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 37.1 99.7 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 33.7 99.7 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 33.0 99.7 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 32.4 99.7 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 32.0 99.7 E-ATMX-35-raw-cel-1574334832 31.7 99.7 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 31.7 99.7 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function 29.9 99.7 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 28.4 99.7 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 28.3 99.7 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 26.5 99.7 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 25.7 99.7 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 25.3 99.6 E-MEXP-1797-raw-cel-1669767958 25.3 99.6 E-MEXP-1797-raw-cel-1669768075 24.0 99.6 E-ATMX-35-raw-cel-1574334800 23.6 99.6 E-MEXP-285-raw-cel-440782725 22.3 99.6 E-MEXP-1797-raw-cel-1669767985 21.8 99.6 E-MEXP-1797-raw-cel-1669768057 20.7 99.6 E-MEXP-1797-raw-cel-1669768066 18.6 99.5 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis 18.0 99.5 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis 18.0 99.5 E-MEXP-1797-raw-cel-1669767994 17.7 99.5 GSM133768 Lindsey_1-20_torpedo-basal_Rep5_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 17.7 99.5 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis 17.1 99.5 GSM133766 Lindsey_1-18_torpedo-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 16.6 99.5 E-MEXP-1797-raw-cel-1669768048 16.4 99.5 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 16.4 99.5 E-MEXP-1797-raw-cel-1669768012 15.0 99.4 E-MEXP-1797-raw-cel-1669768039 14.8 99.4 E-MEXP-285-raw-cel-440782791 14.8 99.4 GSM176876 AWP_AL_Txed_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress 14.3 99.4 GSM157312 Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1 GSE6825 Differential gene expression patterns in potassium-starved and Caesium-treated plants 14.3 99.4 GSM131643 ATGE_2_A GSE5633 AtGenExpress: Developmental series (shoots and stems) 13.9 99.4 E-MEXP-1797-raw-cel-1669768021 13.3 99.4 E-MEXP-1797-raw-cel-1669768084 13.3 99.4 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen) 13.1 99.4 GSM157318 Hammond_3-8_Potassium-starved-shoot_Rep2_ATH1 GSE6825 Differential gene expression patterns in potassium-starved and Caesium-treated plants 12.7 99.3 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 12.7 99.3 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen) 12.6 99.3 E-MEXP-265-raw-cel-414617783 12.4 99.3 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 12.3 99.3 GSM131645 ATGE_2_C GSE5633 AtGenExpress: Developmental series (shoots and stems) 12.1 99.3 E-MEXP-265-raw-cel-414617890 12.0 99.3 E-MEXP-1138-raw-cel-1432772906 11.9 99.3 E-MEXP-509-raw-cel-829148348 11.6 99.3 E-ATMX-35-raw-cel-1574334880 11.0 99.2 GSM133759 Lindsey_1-9_heart-stage-cotyledon_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 11.0 99.2 E-MEXP-1138-raw-cel-1432772938 10.9 99.2 E-MEXP-1797-raw-cel-1669767949 10.9 99.2 GSM131644 ATGE_2_B GSE5633 AtGenExpress: Developmental series (shoots and stems) 10.9 99.2 GSM142662 MB002_ATH1_A2-Eland-ch2 GSE6153 Identification of genes involved in secondary cell wall development in the hypocotyls of short day grown Arabidopsis 10.8 99.2 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 10.5 99.2 GSM133774 Lindsey_1-26_torpedo-meristem_Rep2_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 10.5 99.2 E-ATMX-35-raw-cel-1574334864 10.4 99.2 E-MEXP-1451-raw-cel-1585200362 10.2 99.2 E-MEXP-1797-raw-cel-1669768003 10.2 99.2 E-MEXP-1138-raw-cel-1432773066 9.9 99.1 E-MEXP-1138-raw-cel-1432772810 9.8 99.1 E-MEXP-1138-raw-cel-1432773034 9.6 99.1 E-ATMX-1-raw-cel-1112746095 9.6 99.1 E-MEXP-807-raw-cel-1173273170 9.2 99.1 E-MEXP-1138-raw-cel-1432772842 9.1 99.1 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen) 9.0 99.1 E-MEXP-1138-raw-cel-1432772714 8.9 99.0 E-MEXP-509-raw-cel-829148456 8.9 99.0 GSM157321 Hammond_3-14_Potassium-starved-shoot_Rep3_ATH1 GSE6825 Differential gene expression patterns in potassium-starved and Caesium-treated plants 8.6 99.0 E-MEXP-1138-raw-cel-1432772746
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
