VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 0.42 53.9 1.00 At2g31240 817681 tetratricopeptide repeat (TPR)-containing protein F:binding;P:biological_process unknown;C:cellular_component unknown;MBOFPAV O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.67 81.6 0.94 At2g31740 817731 methyltransferase F:methyltransferase activity;P:metabolic process;C:unknown;OBMPFA O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.50 65.3 0.93 At5g06810 830572 mitochondrial transcription termination factor-related / mTERF-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.47 61.2 0.94 At1g05055 839332 GTF2H2 (GENERAL TRANSCRIPTION FACTOR IIH 2) Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.44 57.2 0.95 At1g56350 842089 peptide chain release factor, putative F:translation release factor activity, codon specific, translation release factor activity;P:translational termination;C:cytoplasm;OBMFPV O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.40 50.8 0.94 At5g10630 830928 elongation factor 1-alpha, putative / EF-1-alpha, putative F:GTP binding, translation elongation factor activity, GTPase activity, zinc ion binding;P:biological_process unknown;C:intracellular;BMOFPAV O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.36 43.6 0.94 At2g03670 814895 CDC48B CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 127.9 99.9 GSM131321 AtGen_6-3421_Saltstress-Roots-6.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 121.3 99.9 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 110.4 99.9 GSM133117 RIKEN-YAMAUCHI1A GSE5687 AtGenExpress: Different temperature treatment of seeds 110.3 99.9 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition 70.5 99.9 GSM131318 AtGen_6-3322_Saltstress-Roots-3.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 43.8 99.8 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition 42.5 99.8 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 35.8 99.7 GSM131706 ATGE_84_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 33.8 99.7 E-MEXP-849-raw-cel-1181980982 33.3 99.7 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 32.9 99.7 GSM133945 Murray_2-1_T0-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 31.3 99.7 GSM131707 ATGE_84_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 30.5 99.7 GSM131317 AtGen_6-3321_Saltstress-Roots-3.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 29.6 99.7 GSM134202 Murray_3-1_D1-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells 28.7 99.7 GSM133952 Murray_2-8_T14-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 27.7 99.7 GSM133953 Murray_2-9_T16-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 26.8 99.7 GSM142905 WW002_ATH1_A1-willa-CON-REP3 GSE6181 Assembly of the cell wall pectic matrix. 26.7 99.7 GSM131705 ATGE_83_C GSE5634 AtGenExpress: Developmental series (siliques and seeds) 26.4 99.7 GSM133950 Murray_2-6_T10-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 24.4 99.6 GSM131703 ATGE_83_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 23.8 99.6 GSM133951 Murray_2-7_T12-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 21.1 99.6 GSM131704 ATGE_83_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 21.1 99.6 GSM142907 WW002_ATH1_A2-willa-ISOX-REP3 GSE6181 Assembly of the cell wall pectic matrix. 20.5 99.6 GSM131702 ATGE_82_C GSE5634 AtGenExpress: Developmental series (siliques and seeds) 20.0 99.6 GSM142906 WW002_ATH1_A2-willa-ISOX-REP2 GSE6181 Assembly of the cell wall pectic matrix. 17.4 99.5 GSM131708 ATGE_84_D GSE5634 AtGenExpress: Developmental series (siliques and seeds) 17.4 99.5 GSM131701 ATGE_82_B GSE5634 AtGenExpress: Developmental series (siliques and seeds) 17.3 99.5 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 17.1 99.5 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 16.1 99.5 GSM184911 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 2 GSE7641 Expression analysis of root cell-types after treatment with salt 15.8 99.5 E-MEXP-300-raw-cel-460515489 15.4 99.5 GSM153927 ahg1-1 rep2 GSE6638 Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA 15.4 99.5 GSM131325 AtGen_6-3521_Saltstress-Roots-12.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress) 15.3 99.4 GSM134204 Murray_3-2_D3-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells 14.7 99.4 GSM133968 Birnbaum_1-19_LRC-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root 14.1 99.4 GSM133973 Birnbaum_1-3_src5-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root 13.5 99.4 GSM133949 Murray_2-5_T8-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 13.2 99.4 GSM133309 RIKEN-NAKABAYASHI4B GSE5700 AtGenExpress: Effect of ABA during seed imbibition 12.9 99.3 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition 12.5 99.3 E-MEXP-300-raw-cel-460515357 12.3 99.3 GSM131700 ATGE_82_A GSE5634 AtGenExpress: Developmental series (siliques and seeds) 12.2 99.3 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition 12.0 99.3 GSM10456 WT Post-Mature Green Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 12.0 99.3 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition 11.3 99.3 E-MEXP-300-raw-cel-460515445 11.2 99.2 E-MEXP-300-raw-cel-460515081 11.0 99.2 E-MEXP-300-raw-cel-460514926 11.0 99.2 GSM133947 Murray_2-3_T4-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 10.6 99.2 GSM184910 Arabidopsis, root cells, columella root cap, 140 mM NaCl, replicate 1 GSE7641 Expression analysis of root cell-types after treatment with salt 10.4 99.2 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition 10.3 99.2 GSM10454 WT Post-Mature Green Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 10.2 99.2 GSM133948 Murray_2-4_T6-APH_Rep1_ATH1 GSE5747 Genome-wide cell cycle studies 10.2 99.2 E-MEXP-849-raw-cel-1181980990 9.7 99.1 GSM153929 ahg3-1 rep2 GSE6638 Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABA 9.6 99.1 E-MEXP-300-raw-cel-460515255 9.4 99.1 E-MEXP-300-raw-cel-460515401 9.3 99.1 GSM184635 Arabidopsis, root cells, 140 mM NaCl, replicate 2 GSE7636 Expression analysis of the effect of protoplasting and FACS sorting in roots 9.2 99.1 GSM266667 Arabidopsis, root cells, columella root cap, -Fe, replicate 2 GSE10501 Expression analysis of root cell-types after iron deficiency (-Fe) treatment 8.9 99.0 E-MEXP-300-raw-cel-460515037 8.8 99.0 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 8.8 99.0 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 8.6 99.0 E-MEXP-849-raw-cel-1181980998
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
