Co-expression analysis

Gene ID At2g25630
Gene name BGLU14 (BETA GLUCOSIDASE 14)
Module size 85 genes
NF 0.77
%ile 93.2



Co-expression network

pink confeito: Transcription factor, green bicone: Binding protein, red cone: Enzyme protein, blue sphere: Other protein
large node: VF over 0.50, middle node: over 0.25, small node: below 0.25



Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
0.9396.41.00At2g25630817104BGLU14 (BETA GLUCOSIDASE 14)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:plant-type cell wall;BOPMFAO.I.H.G.S.X.
0.9095.10.74At5g66150836747glycosyl hydrolase family 38 proteinF:in 6 functions;P:mannose metabolic process, carbohydrate metabolic process;C:endomembrane system;MBOPFAO.I.H.G.S.X.
0.8894.00.74At2g12190815688cytochrome P450, putativeF:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;MPFBOAVO.I.H.G.S.X.
0.8793.50.75At1g19950838584HVA22H (HVA22-LIKE PROTEIN H (ATHVA22H))F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVAO.I.H.G.S.X.
0.8793.50.77At5g52480835324-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.H.G.S.X.
0.8693.10.74At2g31780817735protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVO.I.H.G.S.X.
0.8693.10.76At1g65640842875DegP4 (DegP protease 4)Encodes a putative DegP protease.O.I.H.G.S.X.
0.8693.10.76At3g20030821542F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.8592.40.75At1g20730838663-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMVO.I.H.G.S.X.
0.8592.40.75At3g66656819848AGL91F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOO.I.H.G.S.X.
0.8491.90.77At4g24650828567ATIPT4AB061402 Arabidopsis thaliana AtIPT4 mRNA for cytokinin synthase, complete cdsO.I.H.G.S.X.
0.8391.40.74At5g52140835290protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PMOFVBO.I.H.G.S.X.
0.8391.40.82At5g10660830930calmodulin-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVAO.I.H.G.S.X.
0.8391.40.73At1g29110839786cysteine proteinase, putativeF:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAFO.I.H.G.S.X.
0.8290.90.73At1g07690837282unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFO.I.H.G.S.X.
0.8290.90.69At4g30120829135HMA3 (HEAVY METAL ATPASE 3)encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zincO.I.H.G.S.X.
0.8290.90.76At4g15040827163identical protein binding / serine-type endopeptidaseF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation, negative regulation of catalytic activity;C:unknown;BPOFAMO.I.H.G.S.X.
0.8290.90.73At1g72000843531beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeF:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:cellular_component unknown;OPBO.I.H.G.S.X.
0.8290.90.75At5g03920830271unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.8290.90.72At1g51210841544UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMOBFVO.I.H.G.S.X.
0.8190.40.75At3g27710822393zinc finger protein-relatedF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVBO.I.H.G.S.X.
0.8190.40.69At1g54640841906F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.8190.40.75At3g13370820537unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBO.I.H.G.S.X.
0.8190.40.72At5g26250832694sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:endomembrane system, integral to membrane, membrane;BFMPOAO.I.H.G.S.X.
0.8190.40.74At5g53840835465F-box family protein (FBL13)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;PO.I.H.G.S.X.
0.8190.40.74At4g34330829583unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.H.G.S.X.
0.8089.80.75At1g57780842153heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBAFO.I.H.G.S.X.
0.8089.80.68At1g67800843106copine-relatedF:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;MOPVFO.I.H.G.S.X.
0.8089.80.75At5g23650832430myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POBMO.I.H.G.S.X.
0.7989.10.69At5g44830834513glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMAO.I.H.G.S.X.
0.7989.10.74At3g01880821296unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFMBOO.I.H.G.S.X.
0.7989.10.72At4g27890828902nuclear movement family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBO.I.H.G.S.X.
0.7888.60.69At2g16290816125-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.7888.60.73At3g48950824056glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.H.G.S.X.
0.7888.60.73At5g65370836662epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, binding;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.7888.60.74At2g42090818809ACT9 (ACTIN 9)actin related gene or pseudogene, based on sequence divergence and lack of expressionO.I.H.G.S.X.
0.7888.60.70At2g26870817228phosphoesterase family proteinF:hydrolase activity, acting on ester bonds;P:triglyceride biosynthetic process, phospholipid biosynthetic process;C:endomembrane system;BFPOAO.I.H.G.S.X.
0.7888.60.74At5g63740836494zinc finger protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPVAO.I.H.G.S.X.
0.7788.00.73At1g59800842273cullin-relatedF:ubiquitin protein ligase binding;P:ubiquitin-dependent protein catabolic process;C:cullin-RING ubiquitin ligase complex;MFPOO.I.H.G.S.X.
0.7788.00.69At1g72580843590unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.7788.00.72At4g18870827621heat shock transcription factor family proteinF:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOO.I.H.G.S.X.
0.7788.00.67At1g76290843962AMP-dependent synthetase and ligase family proteinF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVO.I.H.G.S.X.
0.7788.00.72At5g65890836718ACR1 (ACT Domain Repeat 1)Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques.O.I.H.G.S.X.
0.7687.40.68At2g23990816933plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PBOVFMAO.I.H.G.S.X.
0.7687.40.67At2g26880817229AGL41 (AGAMOUS-LIKE 41)F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PO.I.H.G.S.X.
0.7687.40.68At2g39640818547glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOO.I.H.G.S.X.
0.7687.40.73At5g42910834303basic leucine zipper transcription factor (BZIP15)F:transcription factor activity, transcription activator activity, DNA binding;P:regulation of transcription, DNA-dependent, response to stress;C:nucleus;PMOFBO.I.H.G.S.X.
0.7687.40.69At1g02980839415CUL2 (CULLIN 2)encodes an Arabidopsis cullinO.I.H.G.S.X.
0.7687.40.74At2g30730817624serine/threonine protein kinase, putativeF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.H.G.S.X.
0.7687.40.67At5g17470831613calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBO.I.H.G.S.X.
0.7586.90.69At2g03190814848ASK16 (ARABIDOPSIS SKP1-LIKE 16)one of SKP1 homologs. Gene is expressed specifically in the silique.O.I.H.G.S.X.
0.7586.90.68At4g25610828666zinc finger (C2H2 type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:intracellular;OMFBPVO.I.H.G.S.X.
0.7586.90.71At4g11510826756RALFL28 (ralf-like 28)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.O.I.H.G.S.X.
0.7586.90.67At1g28030839696oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:2-oxoglutarate-dependent dioxygenase activity;P:biological_process unknown;C:cellular_component unknown;POBFMO.I.H.G.S.X.
0.7586.90.68At4g37950829951lyaseF:lyase activity;P:biological_process unknown;C:unknown;PFBO.I.H.G.S.X.
0.7486.10.72At4g12140826822zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVO.I.H.G.S.X.
0.7486.10.74At3g06180819792structural constituent of ribosomeF:structural constituent of ribosome;P:translation;C:ribosome, intracellular, chloroplast;PFOO.I.H.G.S.X.
0.7486.10.67At3g09140820068unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.7486.10.70At4g17160827427ATRABB1A (ARABIDOPSIS RAB GTPASE HOMOLOG B1A)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAO.I.H.G.S.X.
0.7486.10.68At4g39000830055AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFO.I.H.G.S.X.
0.7486.10.68At3g15490820788unknown proteinF:unknown;P:biological_process unknown;C:unknown;PFOMO.I.H.G.S.X.
0.7486.10.69At3g03230821322esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:membrane;PBOFO.I.H.G.S.X.
0.7486.10.67At2g27700817316eukaryotic translation initiation factor 2 family protein / eIF-2 family proteinF:translation factor activity, nucleic acid binding, GTP binding, GTPase activity;P:unknown;C:unknown;BOMFAPO.I.H.G.S.X.
0.7486.10.68At2g18490816364zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;POO.I.H.G.S.X.
0.7486.10.66At2g26320817172AGL33 (AGAMOUS-LIKE 33)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOO.I.H.G.S.X.
0.7486.10.67At3g25420822126scpl21 (serine carboxypeptidase-like 21)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.H.G.S.X.
0.7385.50.69At1g60985842390SCRL6 (SCR-Like 6)Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).O.I.H.G.S.X.
0.7385.50.69At5g05260830408CYP79A2 (CYTOCHROME P450 79A2)Encodes cytochrome P450 CYP79A2.O.I.H.G.S.X.
0.7385.50.68At5g0949083080840S ribosomal protein S15 (RPS15B)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAFO.I.H.G.S.X.
0.7385.50.70At2g31760817733zinc finger protein-relatedF:protein binding, zinc ion binding;P:unknown;C:unknown;MOFPVO.I.H.G.S.X.
0.7385.50.68At3g03410821262calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBO.I.H.G.S.X.
0.7385.50.68At3g05310819695MIRO3Encodes a protein with similarity to MIRO GTPases.O.I.H.G.S.X.
0.7385.50.67At3g05860819755MADS-box protein (AGL45)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOO.I.H.G.S.X.
0.7284.80.66At1g20140838604ASK4 (ARABIDOPSIS SKP1-LIKE 4)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:SCF ubiquitin ligase complex, nucleolus, nucleus, cytoplasm;MPOFVO.I.H.G.S.X.
0.7284.80.66At1g73560843690protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PO.I.H.G.S.X.
0.7284.80.70At1g12190837772F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.7284.80.68At1g51290841552F-box family protein (FBX10)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;POO.I.H.G.S.X.
0.7284.80.69At1g64030842706serpin family protein / serine protease inhibitor family proteinF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;MVPBOAFO.I.H.G.S.X.
0.7184.20.69At5g05030830385unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFBO.I.H.G.S.X.
0.7083.50.72At2g24880817025self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.H.G.S.X.
0.6882.20.68At3g49600824122UBP26 (UBIQUITIN-SPECIFIC PROTEASE 26)Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.O.I.H.G.S.X.
0.6882.20.68At2g15740816068zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;POMO.I.H.G.S.X.
0.6781.60.67At3g24060821991self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.H.G.S.X.
0.6579.60.67At2g40820818679-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFOBVAO.I.H.G.S.X.
0.6378.10.72At5g55080835599AtRAN4 (Ras-related nuclear protein 4)A member of RAN GTPase gene family.O.I.H.G.S.X.

Click More genes

Link to AtGenExpress Visualization Tool



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
60.499.8GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
60.399.8GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
59.899.8GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
58.699.8GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
58.099.8GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
57.399.8GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
56.099.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
54.999.8GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
54.699.8GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
53.899.8GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
53.399.8GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
52.099.8GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
51.999.8GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
51.999.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
50.999.8GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
49.599.8GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
49.099.8GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
48.999.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
47.199.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
46.299.8GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
39.499.8GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
38.299.8GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
38.199.8GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
38.199.8GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
35.899.7GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
31.299.7GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
31.099.7GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
25.799.7GSM284392Arabidopsis GCE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
24.899.6GSM284394Arabidopsis GCE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
18.399.5GSM184904Arabidopsis, root cells, protophloem, standard conditions, replicate 1GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
15.899.5GSM311291Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
15.599.5GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
12.899.3GSM184906Arabidopsis, root cells, protophloem, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
12.799.3GSM311289Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 1GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
11.499.3GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
11.099.2GSM284393Arabidopsis GCE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
10.999.2GSM184923Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
9.499.1GSM133303RIKEN-NAKABAYASHI1AGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
9.499.1GSM131700ATGE_82_AGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
9.099.1GSM311290Laser capture microdissected (LCM) cellularized endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stageLink to GEO
8.999.0GSM131702ATGE_82_CGSE5634AtGenExpress: Developmental series (siliques and seeds)Link to GEO
8.899.0GSM133304RIKEN-NAKABAYASHI1BGSE5700AtGenExpress: Effect of ABA during seed imbibitionLink to GEO
8.699.0GSM153927ahg1-1 rep2GSE6638Expression data of germinating ahg1, ahg3 and WT seedling in the presence of ABALink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0282GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO
0.0231GO:0006013The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.Link to AmiGO
0.0222GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG
0.022204120Ubiquitin mediated proteolysisLink to KEGG PATHWAY
0.021100511Other glycan degradationLink to KEGG PATHWAY
0.020100565Ether lipid metabolismLink to KEGG PATHWAY

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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