CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At2g10010

Gene name transposable element gene

Module size 92 genes

NF 0.65

%ile 85.4

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
1.00 100.0 1.00 At2g10010 3768446 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.77 88.0 0.91 At2g41570 818755 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.76 87.4 0.91 At3g45520 3769652 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.74 86.1 0.90 At5g28410 832927 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. H.G. S.X.
0.73 85.5 0.90 At3g29080 822555 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. H.G. S.X.
0.73 85.5 0.89 At3g13270 820526 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.72 84.8 0.89 At1g32590 3766881 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.72 84.8 0.89 At3g25450 3768929 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.72 84.8 0.90 At4g04170 3770474 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.72 84.8 0.89 At2g19840 3768331 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.72 84.8 0.90 At2g07505 815323 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.71 84.2 0.90 At1g36040 3766972 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.71 84.2 0.90 At3g42120 823184 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.71 84.2 0.88 At3g42430 823239 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.71 84.2 0.90 At4g09230 3770053 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.71 84.2 0.91 At2g10090 815466 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.71 84.2 0.91 At2g13270 815813 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.71 84.2 0.90 At3g27980 822422 pectinesterase family protein F:pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFM O.I. H.G. S.X.
0.70 83.5 0.89 At3g60170 3769745 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.70 83.5 0.89 At2g18930 816410 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.70 83.5 0.89 At2g13930 3768460 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.70 83.5 0.90 At4g07750 3769978 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.70 83.5 0.90 At1g36095 840514 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. H.G. S.X.
0.70 83.5 0.89 At1g35770 840482 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.70 83.5 0.89 At4g04560 3769781 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.69 82.9 0.89 At2g14700 815958 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.69 82.9 0.89 At2g07510 3768270 transposable element gene pseudogene of Ulp1 protease family protein O.I. H.G. S.X.
0.69 82.9 0.90 At3g30330 3769073 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.69 82.9 0.89 At1g37110 3767062 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.69 82.9 0.91 At1g43930 3767331 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.69 82.9 0.89 At1g67240 3767657 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.69 82.9 0.91 At2g10050 815462 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.69 82.9 0.88 At1g34090 3766909 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.69 82.9 0.92 At4g07350 826165 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. H.G. S.X.
0.68 82.2 0.89 At3g07380 819926 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. H.G. S.X.
0.68 82.2 0.88 At2g13550 815841 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOP O.I. H.G. S.X.
0.68 82.2 0.88 At1g34610 840365 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.68 82.2 0.88 At1g35995 3766969 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.68 82.2 0.88 At1g43970 840996 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. H.G. S.X.
0.67 81.6 0.89 At1g36590 3767015 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.67 81.6 0.89 At4g03710 3769890 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.67 81.6 0.91 At1g47816 3767392 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.67 81.6 0.90 At2g10900 3768617 transposable element gene similarity to non-LTR retroelement protein O.I. H.G. S.X.
0.67 81.6 0.89 At5g47270 - - O.I. H.G. S.X.
0.67 81.6 0.89 At1g34620 3766920 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.66 80.1 0.89 At2g07760 815423 zinc knuckle (CCHC-type) family protein F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;POFMB O.I. H.G. S.X.
0.66 80.1 0.89 At2g07740 815421 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.66 80.1 0.89 At3g42390 823235 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.65 79.6 0.89 At3g29792 3769053 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.65 79.6 0.88 At3g45270 3769649 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.65 79.6 0.89 At2g14930 3768116 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.65 79.6 0.89 At4g03750 825677 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.64 78.9 0.89 At4g08970 3769794 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.64 78.9 0.88 At5g28420 832929 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. H.G. S.X.
0.64 78.9 0.90 At2g07650 3767967 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.64 78.9 0.89 At3g42680 823288 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.64 78.9 0.90 At3g44270 3769630 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.63 78.1 0.90 At2g14950 3768119 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.63 78.1 0.89 At1g31210 3766867 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.63 78.1 0.88 At1g52610 3767445 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.63 78.1 0.88 At3g27800 822400 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.62 77.3 0.89 At2g05960 3768174 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.62 77.3 0.89 At2g06310 3768228 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.62 77.3 0.90 At4g03860 3770318 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.62 77.3 0.89 At3g31300 822877 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.62 77.3 0.89 At2g07330 3767907 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.61 76.7 0.89 At1g41795 3767198 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.61 76.7 0.89 At1g42680 840876 myosin-related F:motor activity, ATP binding;P:biological_process unknown;C:myosin complex;MOFP O.I. H.G. S.X.
0.61 76.7 0.90 At1g37537 3767073 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.61 76.7 0.89 At4g07540 3770365 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.60 75.7 0.88 At1g42250 840829 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.60 75.7 0.89 At5g28190 832895 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMBV O.I. H.G. S.X.
0.60 75.7 0.89 At2g21310 3768520 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.60 75.7 0.89 At4g04280 3769896 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.60 75.7 0.89 At4g04270 3769894 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.59 74.7 0.88 At4g15590 3770245 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.59 74.7 0.89 At3g30640 822779 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.59 74.7 0.90 At4g09220 826504 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOB O.I. H.G. S.X.
0.59 74.7 0.88 At5g34800 3771185 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.59 74.7 0.89 At3g43950 823511 phosphotransferase, alcohol group as acceptor F:phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:cellular_component unknown;PO O.I. H.G. S.X.
0.58 73.8 0.88 At4g05610 3770279 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.57 73.8 0.89 At2g05030 815051 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.57 73.8 0.89 At5g29050 833041 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
0.56 73.0 0.89 At4g20490 3770090 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.56 73.0 0.89 At1g27870 839680 nucleic acid binding F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBO O.I. H.G. S.X.
0.55 70.6 0.89 At5g20800 3770713 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.55 70.6 0.88 At5g35710 3771292 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.53 68.6 0.88 At4g03800 3770157 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.52 67.4 0.89 At3g31360 3769181 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.49 63.5 0.89 At3g42440 823246 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.48 62.5 0.88 At4g07920 3770071 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.
0.42 53.9 0.88 At1g33813 3766903 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
1.00	100.0	1.00	At2g10010	3768446	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.77	88.0	0.91	At2g41570	818755	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.76	87.4	0.91	At3g45520	3769652	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.74	86.1	0.90	At5g28410	832927	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	H.G.	S.X.
0.73	85.5	0.90	At3g29080	822555	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	H.G.	S.X.
0.73	85.5	0.89	At3g13270	820526	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.72	84.8	0.89	At1g32590	3766881	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.72	84.8	0.89	At3g25450	3768929	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.72	84.8	0.90	At4g04170	3770474	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.72	84.8	0.89	At2g19840	3768331	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.72	84.8	0.90	At2g07505	815323	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.71	84.2	0.90	At1g36040	3766972	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.71	84.2	0.90	At3g42120	823184	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.71	84.2	0.88	At3g42430	823239	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.71	84.2	0.90	At4g09230	3770053	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.71	84.2	0.91	At2g10090	815466	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.71	84.2	0.91	At2g13270	815813	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.71	84.2	0.90	At3g27980	822422	pectinesterase family protein	F:pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFM	O.I.	H.G.	S.X.
0.70	83.5	0.89	At3g60170	3769745	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.70	83.5	0.89	At2g18930	816410	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.70	83.5	0.89	At2g13930	3768460	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.70	83.5	0.90	At4g07750	3769978	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.70	83.5	0.90	At1g36095	840514	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	H.G.	S.X.
0.70	83.5	0.89	At1g35770	840482	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.70	83.5	0.89	At4g04560	3769781	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.69	82.9	0.89	At2g14700	815958	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.69	82.9	0.89	At2g07510	3768270	transposable element gene	pseudogene of Ulp1 protease family protein	O.I.	H.G.	S.X.
0.69	82.9	0.90	At3g30330	3769073	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.69	82.9	0.89	At1g37110	3767062	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.69	82.9	0.91	At1g43930	3767331	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.69	82.9	0.89	At1g67240	3767657	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.69	82.9	0.91	At2g10050	815462	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.69	82.9	0.88	At1g34090	3766909	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.69	82.9	0.92	At4g07350	826165	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	H.G.	S.X.
0.68	82.2	0.89	At3g07380	819926	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	H.G.	S.X.
0.68	82.2	0.88	At2g13550	815841	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOP	O.I.	H.G.	S.X.
0.68	82.2	0.88	At1g34610	840365	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.68	82.2	0.88	At1g35995	3766969	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.68	82.2	0.88	At1g43970	840996	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	H.G.	S.X.
0.67	81.6	0.89	At1g36590	3767015	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.67	81.6	0.89	At4g03710	3769890	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.67	81.6	0.91	At1g47816	3767392	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.67	81.6	0.90	At2g10900	3768617	transposable element gene	similarity to non-LTR retroelement protein	O.I.	H.G.	S.X.
0.67	81.6	0.89	At5g47270		-	-	O.I.	H.G.	S.X.
0.67	81.6	0.89	At1g34620	3766920	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.66	80.1	0.89	At2g07760	815423	zinc knuckle (CCHC-type) family protein	F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;POFMB	O.I.	H.G.	S.X.
0.66	80.1	0.89	At2g07740	815421	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.66	80.1	0.89	At3g42390	823235	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.65	79.6	0.89	At3g29792	3769053	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.65	79.6	0.88	At3g45270	3769649	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.65	79.6	0.89	At2g14930	3768116	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.65	79.6	0.89	At4g03750	825677	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.64	78.9	0.89	At4g08970	3769794	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.64	78.9	0.88	At5g28420	832929	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	H.G.	S.X.
0.64	78.9	0.90	At2g07650	3767967	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.64	78.9	0.89	At3g42680	823288	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.64	78.9	0.90	At3g44270	3769630	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.63	78.1	0.90	At2g14950	3768119	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.63	78.1	0.89	At1g31210	3766867	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.63	78.1	0.88	At1g52610	3767445	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.63	78.1	0.88	At3g27800	822400	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.62	77.3	0.89	At2g05960	3768174	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.62	77.3	0.89	At2g06310	3768228	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.62	77.3	0.90	At4g03860	3770318	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.62	77.3	0.89	At3g31300	822877	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.62	77.3	0.89	At2g07330	3767907	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.61	76.7	0.89	At1g41795	3767198	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.61	76.7	0.89	At1g42680	840876	myosin-related	F:motor activity, ATP binding;P:biological_process unknown;C:myosin complex;MOFP	O.I.	H.G.	S.X.
0.61	76.7	0.90	At1g37537	3767073	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.61	76.7	0.89	At4g07540	3770365	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.60	75.7	0.88	At1g42250	840829	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.60	75.7	0.89	At5g28190	832895	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMBV	O.I.	H.G.	S.X.
0.60	75.7	0.89	At2g21310	3768520	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.60	75.7	0.89	At4g04280	3769896	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.60	75.7	0.89	At4g04270	3769894	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.59	74.7	0.88	At4g15590	3770245	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.59	74.7	0.89	At3g30640	822779	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.59	74.7	0.90	At4g09220	826504	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOB	O.I.	H.G.	S.X.
0.59	74.7	0.88	At5g34800	3771185	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.59	74.7	0.89	At3g43950	823511	phosphotransferase, alcohol group as acceptor	F:phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	H.G.	S.X.
0.58	73.8	0.88	At4g05610	3770279	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.57	73.8	0.89	At2g05030	815051	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.57	73.8	0.89	At5g29050	833041	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.56	73.0	0.89	At4g20490	3770090	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.56	73.0	0.89	At1g27870	839680	nucleic acid binding	F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	H.G.	S.X.
0.55	70.6	0.89	At5g20800	3770713	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.55	70.6	0.88	At5g35710	3771292	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.53	68.6	0.88	At4g03800	3770157	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.52	67.4	0.89	At3g31360	3769181	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.49	63.5	0.89	At3g42440	823246	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.48	62.5	0.88	At4g07920	3770071	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.
0.42	53.9	0.88	At1g33813	3766903	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	H.G.	S.X.

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
43.7 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
42.0 99.8 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
41.4 99.8 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
41.3 99.8 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
39.7 99.8 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.6 99.8 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.1 99.8 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
38.9 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.8 99.8 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.6 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.1 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
37.5 99.7 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.2 99.7 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.0 99.7 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.0 99.7 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
32.9 99.7 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
31.9 99.7 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
31.0 99.7 GSM133773 Lindsey_1-25_torpedo-meristem_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
30.8 99.7 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
29.8 99.7 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
29.5 99.7 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
26.0 99.7 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
22.2 99.6 GSM284389 Arabidopsis GMPE2 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
21.8 99.6 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
20.2 99.6 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
19.5 99.6 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
18.9 99.5 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
16.0 99.5 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
14.4 99.4 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
13.6 99.4 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
13.3 99.4 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
12.4 99.3 GSM128753 De Veylder_1-5_E2Fa-Dpa_Rep1_ATH1 GSE5529 Arabidopsis E2F target genes
12.1 99.3 GSM284388 Arabidopsis GMPE1 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
12.1 99.3 GSM128756 De Veylder_1-8_E2Fa-Dpa_Rep4_ATH1 GSE5529 Arabidopsis E2F target genes
12.0 99.3 GSM133771 Lindsey_1-23_torpedo-apical_Rep5_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.7 99.0 GSM311276 Laser capture microdissected (LCM) micropylar endospermr at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
43.7	99.8	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
42.0	99.8	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
41.4	99.8	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
41.3	99.8	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
39.7	99.8	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.6	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
39.1	99.8	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
38.9	99.8	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.8	99.8	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.6	99.8	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
38.1	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
37.5	99.7	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.2	99.7	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
37.0	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
34.0	99.7	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
32.9	99.7	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
31.9	99.7	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
31.0	99.7	GSM133773	Lindsey_1-25_torpedo-meristem_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
30.8	99.7	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
29.8	99.7	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
29.5	99.7	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
26.0	99.7	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
22.2	99.6	GSM284389	Arabidopsis GMPE2	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
21.8	99.6	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
20.2	99.6	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
19.5	99.6	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
18.9	99.5	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
16.0	99.5	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
14.4	99.4	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
13.6	99.4	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
13.3	99.4	GSM205432	Col_ leaf_ wildtype_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
12.4	99.3	GSM128753	De Veylder_1-5_E2Fa-Dpa_Rep1_ATH1	GSE5529	Arabidopsis E2F target genes
12.1	99.3	GSM284388	Arabidopsis GMPE1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
12.1	99.3	GSM128756	De Veylder_1-8_E2Fa-Dpa_Rep4_ATH1	GSE5529	Arabidopsis E2F target genes
12.0	99.3	GSM133771	Lindsey_1-23_torpedo-apical_Rep5_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.7	99.0	GSM311276	Laser capture microdissected (LCM) micropylar endospermr at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.013 1 GO:0042545 The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

SF	Genes	GO ID	Process Name	Link to AmiGO
0.013	1	GO:0042545	The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage

Gene ID	At2g10010
Gene name	transposable element gene
Module size	92 genes
NF	0.65
%ile	85.4

Co-expression analysis

Gene ID At2g10010 Gene name transposable element gene Module size 92 genes NF 0.65 %ile 85.4

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO0.0131GO:0042545The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaPopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At2g10010

Gene name transposable element gene

Module size 92 genes

NF 0.65

%ile 85.4

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes GO ID Process Name Link to AmiGO
0.013 1 GO:0042545 The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.

SF Genes KEGG ID Pathway name Link to KEGG

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays