CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At2g07696

Gene name ribosomal protein S7 family protein

Module size 9 genes

NF 0.83

%ile 95.9

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
1.00 100.0 1.00 At2g07696 815372 ribosomal protein S7 family protein F:structural constituent of ribosome;P:translation;C:ribosome, small ribosomal subunit, intracellular;BOPMAF O.I. H.G. S.X.
1.00 100.0 0.90 At2g20710 816599 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:mitochondrion;POFMB O.I. H.G. S.X.
1.00 100.0 0.89 At3g49710 824133 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB O.I. H.G. S.X.
1.00 100.0 0.82 At4g39235 830079 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. H.G. S.X.
1.00 100.0 0.89 At5g44150 834438 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBO O.I. H.G. S.X.
0.86 93.1 0.80 At3g21430 821697 - - O.I. H.G. S.X.
0.82 90.9 0.86 At1g55460 841993 Kin17 DNA-binding protein-related F:zinc ion binding;P:biological_process unknown;C:intracellular;MOFPBVA O.I. H.G. S.X.
0.57 73.8 0.79 At3g13070 820495 CBS domain-containing protein / transporter associated domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOMPFA O.I. H.G. S.X.
0.54 69.5 0.74 At2g44980 819106 transcription regulatory protein SNF2, putative F:transcription regulator activity, helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;MFBOPVA O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
1.00	100.0	1.00	At2g07696	815372	ribosomal protein S7 family protein	F:structural constituent of ribosome;P:translation;C:ribosome, small ribosomal subunit, intracellular;BOPMAF	O.I.	H.G.	S.X.
1.00	100.0	0.90	At2g20710	816599	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:mitochondrion;POFMB	O.I.	H.G.	S.X.
1.00	100.0	0.89	At3g49710	824133	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB	O.I.	H.G.	S.X.
1.00	100.0	0.82	At4g39235	830079	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.
1.00	100.0	0.89	At5g44150	834438	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBO	O.I.	H.G.	S.X.
0.86	93.1	0.80	At3g21430	821697	-	-	O.I.	H.G.	S.X.
0.82	90.9	0.86	At1g55460	841993	Kin17 DNA-binding protein-related	F:zinc ion binding;P:biological_process unknown;C:intracellular;MOFPBVA	O.I.	H.G.	S.X.
0.57	73.8	0.79	At3g13070	820495	CBS domain-containing protein / transporter associated domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOMPFA	O.I.	H.G.	S.X.
0.54	69.5	0.74	At2g44980	819106	transcription regulatory protein SNF2, putative	F:transcription regulator activity, helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;MFBOPVA	O.I.	H.G.	S.X.

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
102.3 99.9 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
98.1 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
84.9 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
84.7 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
80.6 99.9 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
78.2 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
76.8 99.9 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
76.2 99.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
74.7 99.9 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
74.6 99.9 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
73.1 99.9 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
71.5 99.9 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
70.6 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
69.4 99.9 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
66.2 99.8 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
65.8 99.8 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
65.2 99.8 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
62.2 99.8 GSM216981 Vector_shoots_4h_GA4+DEX_repl2 GSE8741 DELLA protein direct targets in Arabidopsis
59.2 99.8 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
58.9 99.8 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
56.5 99.8 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
54.6 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
52.7 99.8 E-ATMX-35-raw-cel-1574334832
50.7 99.8 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
50.2 99.8 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition
50.1 99.8 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.0 99.8 GSM216973 Vector_shoots_4h_GA4+DEX_repl1 GSE8741 DELLA protein direct targets in Arabidopsis
47.5 99.8 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
46.8 99.8 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition
39.6 99.8 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
36.5 99.7 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
34.1 99.7 E-ATMX-35-raw-cel-1574334816
32.0 99.7 GSM239251 Columbia glabrous (C24) wild type pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
30.4 99.7 E-ATMX-35-raw-cel-1574334800
29.4 99.7 GSM142740 DH001_ATH1_A7-MPG1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
28.9 99.7 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
23.2 99.6 GSM239253 CaMV::DME pollen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
21.8 99.6 GSM131638 ATGE_73_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
20.7 99.6 GSM131637 ATGE_73_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
19.7 99.6 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
18.8 99.5 GSM239252 Columbia glabrous (C24) wild type stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
16.7 99.5 GSM154504 Arabidopsis desiccated mature pollen grains rep2 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
16.2 99.5 GSM131636 ATGE_73_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
15.4 99.5 E-MEXP-807-raw-cel-1173273144
13.5 99.4 E-ATMX-35-raw-cel-1574334880
13.0 99.4 E-MEXP-1138-raw-cel-1432772714
12.9 99.3 E-MEXP-1138-raw-cel-1432773226
12.2 99.3 GSM239254 CaMV::DME stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
12.1 99.3 E-MEXP-1138-raw-cel-1432772938
11.8 99.3 GSM142739 DH001_ATH1_A6-TCP2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis
11.7 99.3 E-MEXP-807-raw-cel-1173272948
11.7 99.3 E-MEXP-1138-raw-cel-1432772522
11.6 99.3 E-MEXP-1138-raw-cel-1432772682
11.5 99.3 GSM131322 AtGen_6-3422_Saltstress-Roots-6.0h_Rep2 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
11.4 99.3 E-MEXP-807-raw-cel-1173273116
11.1 99.2 E-MEXP-1138-raw-cel-1432773194
11.0 99.2 E-MEXP-1138-raw-cel-1432773162
10.9 99.2 E-MEXP-1138-raw-cel-1432772906
10.8 99.2 E-MEXP-1138-raw-cel-1432772874
10.7 99.2 E-MEXP-1138-raw-cel-1432772778
10.7 99.2 E-MEXP-807-raw-cel-1173273252
10.4 99.2 E-MEXP-1138-raw-cel-1432772586
10.3 99.2 E-MEXP-807-raw-cel-1173273060
10.3 99.2 E-MEXP-285-raw-cel-440782725
10.2 99.2 E-MEXP-1138-raw-cel-1432773354
10.2 99.2 E-MEXP-1138-raw-cel-1432773386
9.9 99.1 GSM131321 AtGen_6-3421_Saltstress-Roots-6.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
9.8 99.1 E-MEXP-1138-raw-cel-1432772650
9.8 99.1 E-MEXP-1138-raw-cel-1432772554
9.7 99.1 E-MEXP-1138-raw-cel-1432772842
9.7 99.1 E-MEXP-1138-raw-cel-1432772746
9.7 99.1 E-MEXP-1138-raw-cel-1432772810
9.6 99.1 E-MEXP-1138-raw-cel-1432772618
9.4 99.1 GSM133030 BC482-2 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
9.3 99.1 E-MEXP-1138-raw-cel-1432773002
9.3 99.1 E-ATMX-35-raw-cel-1574334864
8.9 99.0 GSM154503 Arabidopsis desiccated mature pollen grains rep1 GSE6696 Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
8.8 99.0 E-MEXP-1138-raw-cel-1432772970
8.8 99.0 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.8 99.0 E-MEXP-285-raw-cel-440782791

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
102.3	99.9	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
98.1	99.9	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
84.9	99.9	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
84.7	99.9	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
80.6	99.9	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
78.2	99.9	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
76.8	99.9	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
76.2	99.9	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
74.7	99.9	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
74.6	99.9	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
73.1	99.9	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
71.5	99.9	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
70.6	99.9	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
69.4	99.9	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
66.2	99.8	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
65.8	99.8	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
65.2	99.8	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
62.2	99.8	GSM216981	Vector_shoots_4h_GA4+DEX_repl2	GSE8741	DELLA protein direct targets in Arabidopsis
59.2	99.8	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
58.9	99.8	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
56.5	99.8	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
54.6	99.8	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
52.7	99.8	E-ATMX-35-raw-cel-1574334832
50.7	99.8	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
50.2	99.8	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
50.1	99.8	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
49.0	99.8	GSM216973	Vector_shoots_4h_GA4+DEX_repl1	GSE8741	DELLA protein direct targets in Arabidopsis
47.5	99.8	GSM205432	Col_ leaf_ wildtype_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
46.8	99.8	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
39.6	99.8	GSM205428	met1-3_leaf_fourth-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
36.5	99.7	GSM205435	Col_ leaf_ wildtype_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
34.1	99.7	E-ATMX-35-raw-cel-1574334816
32.0	99.7	GSM239251	Columbia glabrous (C24) wild type pollen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
30.4	99.7	E-ATMX-35-raw-cel-1574334800
29.4	99.7	GSM142740	DH001_ATH1_A7-MPG1	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
28.9	99.7	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
23.2	99.6	GSM239253	CaMV::DME pollen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
21.8	99.6	GSM131638	ATGE_73_C	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
20.7	99.6	GSM131637	ATGE_73_B	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
19.7	99.6	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
18.8	99.5	GSM239252	Columbia glabrous (C24) wild type stamen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
16.7	99.5	GSM154504	Arabidopsis desiccated mature pollen grains rep2	GSE6696	Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
16.2	99.5	GSM131636	ATGE_73_A	GSE5632	AtGenExpress: Developmental series (flowers and pollen)
15.4	99.5	E-MEXP-807-raw-cel-1173273144
13.5	99.4	E-ATMX-35-raw-cel-1574334880
13.0	99.4	E-MEXP-1138-raw-cel-1432772714
12.9	99.3	E-MEXP-1138-raw-cel-1432773226
12.2	99.3	GSM239254	CaMV::DME stamen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
12.1	99.3	E-MEXP-1138-raw-cel-1432772938
11.8	99.3	GSM142739	DH001_ATH1_A6-TCP2	GSE6162	Transcriptome analysis of Arabidopsis microgametogenesis
11.7	99.3	E-MEXP-807-raw-cel-1173272948
11.7	99.3	E-MEXP-1138-raw-cel-1432772522
11.6	99.3	E-MEXP-1138-raw-cel-1432772682
11.5	99.3	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
11.4	99.3	E-MEXP-807-raw-cel-1173273116
11.1	99.2	E-MEXP-1138-raw-cel-1432773194
11.0	99.2	E-MEXP-1138-raw-cel-1432773162
10.9	99.2	E-MEXP-1138-raw-cel-1432772906
10.8	99.2	E-MEXP-1138-raw-cel-1432772874
10.7	99.2	E-MEXP-1138-raw-cel-1432772778
10.7	99.2	E-MEXP-807-raw-cel-1173273252
10.4	99.2	E-MEXP-1138-raw-cel-1432772586
10.3	99.2	E-MEXP-807-raw-cel-1173273060
10.3	99.2	E-MEXP-285-raw-cel-440782725
10.2	99.2	E-MEXP-1138-raw-cel-1432773354
10.2	99.2	E-MEXP-1138-raw-cel-1432773386
9.9	99.1	GSM131321	AtGen_6-3421_Saltstress-Roots-6.0h_Rep1	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
9.8	99.1	E-MEXP-1138-raw-cel-1432772650
9.8	99.1	E-MEXP-1138-raw-cel-1432772554
9.7	99.1	E-MEXP-1138-raw-cel-1432772842
9.7	99.1	E-MEXP-1138-raw-cel-1432772746
9.7	99.1	E-MEXP-1138-raw-cel-1432772810
9.6	99.1	E-MEXP-1138-raw-cel-1432772618
9.4	99.1	GSM133030	BC482-2	GSE5684	AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
9.3	99.1	E-MEXP-1138-raw-cel-1432773002
9.3	99.1	E-ATMX-35-raw-cel-1574334864
8.9	99.0	GSM154503	Arabidopsis desiccated mature pollen grains rep1	GSE6696	Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis
8.8	99.0	E-MEXP-1138-raw-cel-1432772970
8.8	99.0	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.8	99.0	E-MEXP-285-raw-cel-440782791

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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Gene ID	At2g07696
Gene name	ribosomal protein S7 family protein
Module size	9 genes
NF	0.83
%ile	95.9

Co-expression analysis

Gene ID At2g07696 Gene name ribosomal protein S7 family protein Module size 9 genes NF 0.83 %ile 95.9

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaPopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At2g07696

Gene name ribosomal protein S7 family protein

Module size 9 genes

NF 0.83

%ile 95.9

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes GO ID Process Name Link to AmiGO

SF Genes KEGG ID Pathway name Link to KEGG

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays