VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 0.56 73.0 1.00 At1g74560 843797 NRP1 (NAP1-RELATED PROTEIN 1) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP2. Bind histones Histone2A and Histone2B and associate with chromatin in vivo. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.67 81.6 0.93 At2g31060 817658 elongation factor family protein F:GTP binding, translation elongation factor activity, GTPase activity;P:unknown;C:intracellular;BOMPFA O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.57 73.8 0.97 At1g18800 838462 NRP2 (NAP1-RELATED PROTEIN 2) Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.33 38.1 0.94 At2g31410 817699 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBAV O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.32 35.7 0.94 At3g20330 821577 aspartate carabmoyltransferase, chloroplast / aspartate transcarbamylase / ATCase (PYRB) encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.31 33.8 0.94 At4g31790 829307 diphthine synthase, putative (DPH5) F:methyltransferase activity, diphthine synthase activity;P:peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process;C:cellular_component unknown;AOMFBP O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.27 26.2 0.94 At1g55900 842040 TIM50 component of a translocase in the mitochondrial inner membrane O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 173.5 100.0 E-MEXP-509-raw-cel-829148703 116.1 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 105.5 99.9 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 103.1 99.9 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 92.7 99.9 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 83.1 99.9 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 82.5 99.9 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 66.4 99.8 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 64.4 99.8 GSM218595 Whole roots 3.5hr KNO3 treated then frozen, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 62.1 99.8 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 51.7 99.8 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 50.6 99.8 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 44.0 99.8 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 42.5 99.8 E-MEXP-1797-raw-cel-1669768048 38.3 99.8 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 36.0 99.7 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 33.5 99.7 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 33.0 99.7 GSM218592 Whole roots 3.5hr KCl control treated then frozen, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 32.1 99.7 GSM218596 Whole roots 3.5hr KNO3 treated then frozen, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 31.7 99.7 GSM218593 Whole roots 3.5hr KCl control treated then frozen, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 30.5 99.7 E-MEXP-1797-raw-cel-1669767958 30.4 99.7 E-MEXP-509-raw-cel-829148276 29.8 99.7 E-MEXP-1797-raw-cel-1669768066 29.1 99.7 E-MEXP-509-raw-cel-829148165 28.8 99.7 GSM13783 Dexamethasone plus cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition 28.3 99.7 E-MEXP-509-raw-cel-829148348 27.9 99.7 GSM13784 Cycloheximide - replicate GSE911 Identification of LEAFY targets during reproductive transition 27.7 99.7 E-MEXP-509-raw-cel-829148201 27.4 99.7 E-MEXP-1797-raw-cel-1669767985 25.3 99.6 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 24.9 99.6 GSM13780 Cycloheximide GSE911 Identification of LEAFY targets during reproductive transition 23.5 99.6 GSM13779 Dexamethasone plus cycloheximide GSE911 Identification of LEAFY targets during reproductive transition 22.5 99.6 E-MEXP-509-raw-cel-829148842 22.2 99.6 GSM184560 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 22.0 99.6 GSM142734 DH001_ATH1_A1-UNM1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis 21.8 99.6 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 21.4 99.6 E-MEXP-1797-raw-cel-1669767949 21.1 99.6 E-MEXP-509-raw-cel-829148808 20.8 99.6 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 20.7 99.6 E-MEXP-509-raw-cel-829148738 20.5 99.6 E-MEXP-1797-raw-cel-1669767994 20.4 99.6 E-MEXP-509-raw-cel-829148313 20.3 99.6 E-MEXP-1797-raw-cel-1669767976 20.3 99.6 E-MEXP-509-raw-cel-829148877 19.8 99.6 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 19.6 99.6 E-MEXP-509-raw-cel-829148456 19.4 99.6 E-MEXP-1797-raw-cel-1669768057 18.8 99.5 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 18.2 99.5 GSM218594 Whole roots 3.5hr KNO3 treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 18.1 99.5 E-MEXP-509-raw-cel-829148129 18.1 99.5 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 18.1 99.5 E-MEXP-509-raw-cel-829148492 17.6 99.5 E-MEXP-1797-raw-cel-1669768003 17.6 99.5 GSM184561 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes with KNO3, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 17.5 99.5 E-MEXP-509-raw-cel-829148913 17.2 99.5 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 17.1 99.5 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 17.1 99.5 GSM218591 Whole roots 3.5hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 17.0 99.5 E-MEXP-509-raw-cel-829148240 16.8 99.5 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 16.4 99.5 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 15.2 99.4 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 14.3 99.4 E-MEXP-509-raw-cel-829148772 14.1 99.4 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 13.8 99.4 E-MEXP-1797-raw-cel-1669768012 12.9 99.3 E-ATMX-13-raw-cel-1556149935 12.7 99.3 E-MEXP-1797-raw-cel-1669768075 12.3 99.3 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 11.9 99.3 E-MEXP-509-raw-cel-829148632 11.5 99.3 E-ATMX-31-raw-cel-1516947882 11.4 99.3 E-MEXP-509-raw-cel-829148420 11.3 99.3 E-MEXP-1797-raw-cel-1669768084 11.1 99.2 GSM142737 DH001_ATH1_A4-UNM2 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis 11.1 99.2 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function 10.5 99.2 E-MEXP-509-raw-cel-829148525 10.5 99.2 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 10.0 99.2 GSM176876 AWP_AL_Txed_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress 9.9 99.1 GSM142735 DH001_ATH1_A2-BCP1 GSE6162 Transcriptome analysis of Arabidopsis microgametogenesis 9.3 99.1 E-MEXP-807-raw-cel-1173273144 9.2 99.1 E-MEXP-807-raw-cel-1173272948 9.2 99.1 E-MEXP-1797-raw-cel-1669768021 9.0 99.1 E-MEXP-807-raw-cel-1173273252 8.9 99.0 E-ATMX-31-raw-cel-1516947899 8.9 99.0 GSM184552 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 8.8 99.0 E-MEXP-807-raw-cel-1173273116 8.7 99.0 E-MEXP-509-raw-cel-829148561
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
