VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 1.00 100.0 1.00 At1g61500 842444 S-locus protein kinase, putative F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.09 2.8 0.55 At5g61300 836251 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.03 0.6 0.55 At4g21060 827853 galactosyltransferase family protein F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:protein amino acid glycosylation;C:membrane;MPOFB O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.03 0.6 0.55 At4g37170 829871 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMB O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) - 0.0 0.56 At2g30790 817630 PSBP-2 (photosystem II subunit P-2) Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) - 0.0 0.55 At3g01380 821231 catalytic/ transferase F:transferase activity, catalytic activity;P:GPI anchor biosynthetic process, metabolic process;C:endoplasmic reticulum;MFOPB O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 29.6 99.7 GSM270870 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1 29.5 99.7 GSM270868 Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 GSE10719 Response of Arabidopsis cell culture to phytoprostane A1 23.3 99.6 GSM133293 NO.30 GSE5698 AtGenExpress: Cytokinin treatment of seedlings 22.3 99.6 GSM311287 Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 1 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage 21.6 99.6 GSM133779 Lindsey_1-5_globular-basal_Rep2_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 20.1 99.6 GSM311284 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage 19.6 99.6 GSM311288 Laser capture microdissected (LCM) embryo proper at the linear-cotyledon stage, biological replicate 2 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage 17.9 99.5 GSM284398 Arabidopsis GGSc2 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 17.5 99.5 GSM131454 AtGen_6-9322_Heatstress-Roots-3.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress) 17.3 99.5 GSM297896 LWD1 and LWD2 in Arabidopsis photoperiod regulation (wt rep 2) GSE11762 LWD1 and LWD2 in Arabidopsis photoperiod regulation 17.0 99.5 GSM131453 AtGen_6-9321_Heatstress-Roots-3.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress) 16.7 99.5 GSM147964 WT Globular Stage Seed 2 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 15.4 99.5 GSM131449 AtGen_6-9221_Heatstress-Roots-1.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress) 15.3 99.4 E-ATMX-30-raw-cel-1513696731 14.8 99.4 GSM297895 LWD1 and LWD2 in Arabidopsis photoperiod regulation (lwd1lwd2 rep 1) GSE11762 LWD1 and LWD2 in Arabidopsis photoperiod regulation 14.7 99.4 GSM297894 LWD1 and LWD2 in Arabidopsis photoperiod regulation (wt rep 1) GSE11762 LWD1 and LWD2 in Arabidopsis photoperiod regulation 14.7 99.4 GSM147963 WT Globular Stage Seed 1 GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle 14.6 99.4 GSM133292 NO.29 GSE5698 AtGenExpress: Cytokinin treatment of seedlings 14.4 99.4 GSM139884 eif3h_non-polysome_rep2 GSE6024 eif3h/WT polysome loading 14.3 99.4 GSM284391 Arabidopsis GPE3 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 14.2 99.4 GSM133291 NO.28 GSE5698 AtGenExpress: Cytokinin treatment of seedlings 13.7 99.4 E-MEXP-849-raw-cel-1181981030 13.2 99.4 GSM125254 Seedling_OEA3L5_rep1 GSE5465 Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes 12.9 99.3 E-ATMX-30-raw-cel-1513696885 12.8 99.3 GSM105206 sta1_no treatement_Rep2 GSE4662 STA1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover and stress tolerance 12.7 99.3 GSM125256 Seedling_OETOP6B_rep1 GSE5465 Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes 12.7 99.3 GSM134448 St.Clair_1-73_291_Mt-0_0.02%-silwet_Rep1_ATH1 GSE5758 Expression Level Polymorphism Project (ELP) - Mt-0 12.5 99.3 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 12.1 99.3 GSM131450 AtGen_6-9222_Heatstress-Roots-1.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress) 11.7 99.3 GSM125255 Seedling_OEA3L5_rep2 GSE5465 Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes 11.6 99.3 GSM147965 lec1-1 Globular Stage Seed 1 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 11.5 99.3 E-MEXP-185-raw-cel-358912054 11.2 99.2 GSM204069 protoplast_hypoxia_rep1 GSE8248 Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells 11.0 99.2 GSM311283 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage 10.8 99.2 GSM131448 AtGen_6-9212_Heatstress-Shoots-1.0h_Rep2 GSE5628 AtGenExpress: Stress Treatments (Heat stress) 10.8 99.2 GSM284390 Arabidopsis GPE2 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 10.7 99.2 GSM131170 AtGen_D-2_1-FL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments 10.6 99.2 GSM125257 Seedling_OETOP6B_rep2 GSE5465 Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes 10.4 99.2 GSM311295 Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 1 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage 10.4 99.2 E-MEXP-849-raw-cel-1181981038 10.2 99.2 E-MEXP-849-raw-cel-1181981006 10.2 99.2 GSM147966 lec1-1 Globular Stage Seed 2 GSE1051 Seed development in LEAFY COTYLEDON1 mutants 10.1 99.2 GSM133820 Yang_1-5_young-pod_Rep3_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana 10.1 99.2 E-MEXP-849-raw-cel-1181981046 10.0 99.2 E-MEXP-285-raw-cel-440783213 9.7 99.1 GSM131200 AtGen_D-34_3-FL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments 9.7 99.1 GSM131447 AtGen_6-9211_Heatstress-Shoots-1.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress) 9.6 99.1 E-ATMX-30-raw-cel-1513696930 9.1 99.1 GSM125252 Seedling_wild-type_rep1 GSE5465 Gene expression in wild-type and transgenic plants overexpressing rice topoisomerase6 genes 9.1 99.1 GSM284397 Arabidopsis GGSc1 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. 8.9 99.0 GSM207292 Seedling_ConstantWhiteLight_48hr GSE8365 Identification of circadian-regulated genes of Arabidopsis thaliana. 8.9 99.0 E-MEXP-807-raw-cel-1173273252 8.7 99.0 GSM311286 Laser capture microdissected (LCM) whole seed sections at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage 8.6 99.0 GSM131185 AtGen_D-18_2-FL_REP2_ATH1 GSE5617 AtGenExpress: Light treatments 8.6 99.0 GSM133760 Lindsey_1-12_heart-stage-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 8.6 99.0 GSM131206 AtGen_D-40_3-WL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments 8.6 99.0 GSM311278 Laser capture microdissected (LCM) peripheral endosperm at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
