CoP: Co-expressed Biological Processes

Co-expression analysis

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.15	7.8	1.00	At1g53400	841776	unknown protein	F:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MPFO	O.I.	H.G.	S.X.
0.20	14.4	0.80	At2g01450	814673	ATMPK17	member of MAP Kinase	O.I.	H.G.	S.X.
0.17	10.2	0.78	At2g41880	818788	GK-1 (GUANYLATE KINASE 1)	Guanylate kinase. Involved in nucleotide metabolism.	O.I.	H.G.	S.X.
0.08	2.3	0.80	At1g33050	840200	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMFP	O.I.	H.G.	S.X.
0.07	1.9	0.82	At4g01960	828190	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	H.G.	S.X.

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
49.9	99.8	GSM13780	Cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
48.4	99.8	GSM13783	Dexamethasone plus cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
47.0	99.8	GSM13784	Cycloheximide - replicate	GSE911	Identification of LEAFY targets during reproductive transition
44.5	99.8	GSM13779	Dexamethasone plus cycloheximide	GSE911	Identification of LEAFY targets during reproductive transition
19.6	99.6	E-MEXP-807-raw-cel-1173273116
16.5	99.5	GSM205185	protoplast_KIN10_rep2	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells
15.9	99.5	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
14.8	99.4	E-MEXP-807-raw-cel-1173273144
14.0	99.4	E-MEXP-807-raw-cel-1173273170
12.4	99.3	GSM39196	RRE1_Chitin2	GSE2169	rre1 and rre2 mutants
12.3	99.3	E-MEXP-807-raw-cel-1173273088
12.2	99.3	E-MEXP-807-raw-cel-1173273060
11.5	99.3	E-MEXP-807-raw-cel-1173273252
11.1	99.2	GSM131322	AtGen_6-3422_Saltstress-Roots-6.0h_Rep2	GSE5623	AtGenExpress: Stress Treatments (Salt stress)
10.8	99.2	E-MEXP-807-raw-cel-1173272948
9.9	99.1	E-MEXP-807-raw-cel-1173273196
9.3	99.1	E-MEXP-807-raw-cel-1173273223
9.2	99.1	GSM205159	protoplast_KIN10_rep1	GSE8257	Identification of KIN10-target genes in Arabidopsis mesophyll cells

SF	Genes	GO ID	Process Name	Link to AmiGO
0.167	1	GO:0009117	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates).