| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | O.I. | H.G. | S.X. | Other DB |
| 1.00 | 100.0 | 1.00 | At1g35900 | 840492 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.59 | 74.7 | 0.83 | At1g60280 | 842323 | ANAC023 (Arabidopsis NAC domain containing protein 23) | F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.56 | 73.0 | 0.86 | At1g47730 | 841184 | F-box family protein | F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO | O.I. | H.G. | S.X. | |
| 0.56 | 73.0 | 0.87 | At2g44880 | 819097 | pentatricopeptide (PPR) repeat-containing protein | F:unknown;P:biological_process unknown;C:endomembrane system;POFM | O.I. | H.G. | S.X. | |
| 0.54 | 69.5 | 0.85 | At1g09410 | 837463 | pentatricopeptide (PPR) repeat-containing protein | F:unknown;P:biological_process unknown;C:unknown;POMFB | O.I. | H.G. | S.X. | |
| 0.48 | 62.5 | 0.84 | At1g11690 | 837713 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV | O.I. | H.G. | S.X. | |
| 0.48 | 62.5 | 0.83 | At3g22340 | 3768898 | transposable element gene | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.48 | 62.5 | 0.84 | At3g04990 | 819659 | - | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV | O.I. | H.G. | S.X. | |
| 0.48 | 62.5 | 0.83 | At2g35970 | 818170 | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.47 | 61.2 | 0.86 | At1g46912 | 841119 | F-box family protein-related | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.47 | 61.2 | 0.84 | At5g26350 | 832704 | transposable element gene | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.47 | 61.2 | 0.83 | At3g24330 | 822022 | glycosyl hydrolase family 17 protein | F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFBO | O.I. | H.G. | S.X. | |
| 0.47 | 61.2 | 0.83 | At2g26790 | 817220 | pentatricopeptide (PPR) repeat-containing protein | F:unknown;P:biological_process unknown;C:mitochondrion;POMFBAV | O.I. | H.G. | S.X. | |
| 0.46 | 59.8 | 0.83 | At1g01760 | 839252 | RNA binding / adenosine deaminase | F:RNA binding, adenosine deaminase activity;P:RNA processing;C:cellular_component unknown;MFOP | O.I. | H.G. | S.X. | |
| 0.46 | 59.8 | 0.86 | At3g19070 | 821441 | cell wall protein-related | F:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVA | O.I. | H.G. | S.X. | |
| 0.46 | 59.8 | 0.85 | At4g05340 | 825882 | ATP binding | F:ATP binding;P:biological_process unknown;C:cellular_component unknown;PFMOBV | O.I. | H.G. | S.X. | |
| 0.46 | 59.8 | 0.85 | At5g38500 | 833838 | DNA binding | F:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;OMPFB | O.I. | H.G. | S.X. | |
| 0.45 | 58.3 | 0.84 | At1g18050 | 838385 | SWAP (Suppressor-of-White-APricot)/surp domain-containing protein | F:RNA binding;P:RNA processing;C:cellular_component unknown;MPOF | O.I. | H.G. | S.X. | |
| 0.45 | 58.3 | 0.83 | At3g49170 | 824078 | EMB2261 (embryo defective 2261) | F:unknown;P:embryonic development ending in seed dormancy;C:chloroplast;POMFB | O.I. | H.G. | S.X. | |
| 0.44 | 57.2 | 0.85 | At2g04310 | 3768003 | transposable element gene | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.44 | 57.2 | 0.85 | At2g34580 | 818022 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPAV | O.I. | H.G. | S.X. | |
| 0.43 | 55.3 | 0.85 | At3g23650 | 821945 | protein kinase-related | F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.84 | At4g22500 | | - | - | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.84 | At5g27810 | 832843 | sequence-specific DNA binding / transcription factor | F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.84 | At3g45570 | 823699 | zinc finger (C3HC4-type RING finger) family protein | F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.83 | At1g29570 | 839834 | zinc finger protein-related | F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOBFPVA | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.83 | At1g29730 | 839851 | ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.84 | At2g30430 | 817594 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.39 | 48.4 | 0.84 | At2g31700 | 817726 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P | O.I. | H.G. | S.X. | |
| 0.38 | 46.7 | 0.84 | At1g57906 | 842163 | - | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.38 | 46.7 | 0.83 | At5g40130 | 3771383 | - | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.38 | 46.7 | 0.84 | At3g57900 | 824959 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.36 | 43.6 | 0.83 | At2g33160 | 817877 | glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein | F:polygalacturonase activity, nucleic acid binding;P:carbohydrate metabolic process;C:endomembrane system;PFBOMA | O.I. | H.G. | S.X. | |
| 0.35 | 41.6 | 0.84 | At2g20970 | 816631 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFAPV | O.I. | H.G. | S.X. | |
| 0.35 | 41.6 | 0.85 | At3g47240 | 823877 | transposable element gene | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.35 | 41.6 | 0.83 | At5g08490 | 830748 | pentatricopeptide (PPR) repeat-containing protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF | O.I. | H.G. | S.X. | |
| 0.30 | 32.1 | 0.84 | At3g20690 | 821616 | F-box protein-related | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| 0.29 | 30.3 | 0.84 | At2g14410 | 3768296 | - | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.29 | 30.3 | 0.84 | At2g22350 | 816767 | transposable element gene | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.26 | 24.4 | 0.84 | At1g44990 | 841064 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:endomembrane system | O.I. | H.G. | S.X. | |
| 0.26 | 24.4 | 0.84 | At3g42730 | 823306 | transposable element gene | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.23 | 19.3 | 0.84 | At4g07360 | 3770409 | transposable element gene | F:unknown;P:unknown;C:unknown | O.I. | H.G. | S.X. | |
| 0.21 | 15.8 | 0.84 | At2g19420 | 816461 | unknown protein | F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P | O.I. | H.G. | S.X. | |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
| 74.3 | 99.9 | GSM205428 | met1-3_leaf_fourth-selfed generation_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation |  |
| 67.5 | 99.8 | GSM205430 | met1-3_leaf_fourth-selfed generation_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 63.2 | 99.8 | GSM133766 | Lindsey_1-18_torpedo-root_Rep3_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 60.7 | 99.8 | GSM205364 | met1-3_leaf_second-selfed generation_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 60.6 | 99.8 | GSM143310 | Tsu_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 58.7 | 99.8 | GSM143309 | Tsu_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 56.9 | 99.8 | GSM143308 | Tsu_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 50.0 | 99.8 | GSM253645 | High_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 49.4 | 99.8 | GSM143306 | High_Na_seg_pool_tsu_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 48.3 | 99.8 | GSM143300 | Ts_genomic_hyb_3 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 46.2 | 99.8 | GSM143307 | Low_Na_seg_pool_tsu_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 46.1 | 99.8 | GSM205426 | met1-3_leaf_second-selfed generation_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 45.6 | 99.8 | GSM143301 | Ts_genomic_hyb_2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 45.0 | 99.8 | GSM143298 | Low_Na_seg_pool_ts_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 44.8 | 99.8 | GSM253646 | Low_Mo_seg_pool_Ler_col_F2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 44.5 | 99.8 | GSM143299 | High_Na_seg_pool_ts_col_F2 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 43.1 | 99.8 | GSM143302 | Ts_genomic_hyb_1 | GSE6203 | Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 | |
| 38.6 | 99.8 | GSM253649 | Col-0-2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 38.6 | 99.8 | GSM253648 | Col-0-1 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 35.4 | 99.7 | GSM253647 | Col-0 3 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 34.8 | 99.7 | GSM253651 | Ler 1 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 33.9 | 99.7 | GSM184556 | Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 33.8 | 99.7 | GSM226530 | LCOLUMELLASB | GSE8934 | A high resolution organ expression map reveals novel expression patterns and predicts cellular function | |
| 31.3 | 99.7 | GSM253652 | Ler 2 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 29.3 | 99.7 | GSM253650 | Ler 3 | GSE10039 | Low_Mo_Arabidopsis_mapping_MOT1 | |
| 25.8 | 99.7 | GSM184551 | Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 23.2 | 99.6 | GSM205432 | Col_ leaf_ wildtype_rep01 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 22.4 | 99.6 | GSM205435 | Col_ leaf_ wildtype_rep02 | GSE8279 | Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation | |
| 19.3 | 99.6 | GSM133762 | Lindsey_1-14_torpedo-root_Rep1_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 18.5 | 99.5 | GSM133775 | Lindsey_1-27_torpedo-meristem_Rep3_ATH1 | GSE5730 | Transcriptional profiling of laser-capture micro-dissected embryonic tissues | |
| 18.3 | 99.5 | GSM270870 | Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep3 | GSE10719 | Response of Arabidopsis cell culture to phytoprostane A1 | |
| 16.4 | 99.5 | GSM131707 | ATGE_84_B | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) | |
| 13.9 | 99.4 | GSM270868 | Arabidopsis cell culture, 4 h_response to phytoprostane A1_rep2 | GSE10719 | Response of Arabidopsis cell culture to phytoprostane A1 | |
| 13.8 | 99.4 | GSM131708 | ATGE_84_D | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) | |
| 13.5 | 99.4 | GSM131706 | ATGE_84_A | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) | |
| 12.4 | 99.3 | GSM184537 | Whole roots 2hr KCl control treated then frozen, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 10.8 | 99.2 | GSM189112 | HSP90_Reduced_RNAi-A3_Biological_Replicate_2_Technical_Replicate_1 | GSE7796 | Phenotypic Diversity and Altered Environmental Plasticity in Arabidopsis thaliana with Reduced HSP90 Levels | |
| 10.8 | 99.2 | GSM176876 | AWP_AL_Txed_1 | GSE7334 | Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress | |
| 10.3 | 99.2 | GSM184497 | Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 9.7 | 99.1 | GSM184552 | Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2 | GSE7631 | Cell-specific nitrogen responses in the Arabidopsis root | |
| 9.6 | 99.1 | GSM131703 | ATGE_83_A | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) | |
| 9.4 | 99.1 | E-MEXP-1138-raw-cel-1432773290 | | | | |
| 9.3 | 99.1 | E-MEXP-1138-raw-cel-1432773258 | | | | |
| 9.2 | 99.1 | GSM284389 | Arabidopsis GMPE2 | GSE11262 | Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage. | |
| 9.1 | 99.1 | GSM131705 | ATGE_83_C | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) | |
| 8.9 | 99.0 | GSM131704 | ATGE_83_B | GSE5634 | AtGenExpress: Developmental series (siliques and seeds) | |
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
