VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB 0.35 41.6 1.00 At1g19610 838548 PDF1.4 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.05 1.1 0.49 At4g07850 3770287 transposable element gene F:unknown;P:unknown;C:unknown O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.02 0.4 0.51 At5g60470 836168 nucleic acid binding / transcription factor/ zinc ion binding F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPF O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) 0.01 0.2 0.51 At1g72060 843537 serine-type endopeptidase inhibitor F:serine-type endopeptidase inhibitor activity;P:response to oxidative stress;C:endomembrane system;P O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report) - 0.0 0.48 At3g18250 821353 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMFO O.I. H.G. S.X. Please select TAIR (integral) KEGG (integral) PlantTribes (integral) Gramene (integral) MPSS (genome) InParanoid (ortholog) Plant RBP (ortholog) SIGnAL (T-DNA) RAFL (full-length clone) AtGDB (genome) Genevestigator (expression) eFP Browser (expression) AVT (expression) ATTED-II (co-expression) AtcisDB (cis-element) SUBA (hydropathy) AtProteome Plant Proteome Database PMN (pathway) KaPPA-View 4 (pathway) RnR (over-expression) iHOP (report)
Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO 169.3 100.0 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 157.7 99.9 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 113.6 99.9 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 105.3 99.9 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 100.1 99.9 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 96.2 99.9 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 92.5 99.9 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 92.0 99.9 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 91.8 99.9 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 91.3 99.9 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 89.8 99.9 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1 89.1 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 88.6 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 87.9 99.9 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 86.4 99.9 GSM133781 Lindsey_1-6_globular-basal_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 79.4 99.9 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 76.5 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 72.0 99.9 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 70.1 99.9 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 68.9 99.9 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 64.8 99.8 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1 60.9 99.8 GSM133760 Lindsey_1-12_heart-stage-root_Rep3_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues 54.9 99.8 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 41.2 99.8 GSM205435 Col_ leaf_ wildtype_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 40.2 99.8 E-MEXP-828-raw-cel-1156922438 38.3 99.8 E-MEXP-828-raw-cel-1156922809 37.2 99.7 E-MEXP-828-raw-cel-1156922386 36.8 99.7 E-ATMX-35-raw-cel-1574334816 36.3 99.7 GSM184497 Endodermis&Pericycle root cells 2hr transitory KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 33.3 99.7 E-MEXP-828-raw-cel-1156922968 32.4 99.7 E-MEXP-828-raw-cel-1156922416 30.6 99.7 E-MEXP-828-raw-cel-1156922794 30.5 99.7 E-ATMX-35-raw-cel-1574334832 30.2 99.7 E-MEXP-807-raw-cel-1173273144 29.1 99.7 E-MEXP-828-raw-cel-1156922684 28.1 99.7 E-MEXP-828-raw-cel-1156922872 27.0 99.7 E-MEXP-807-raw-cel-1173273196 26.9 99.7 E-MEXP-828-raw-cel-1156922923 25.6 99.7 E-MEXP-828-raw-cel-1156922944 23.4 99.6 E-MEXP-828-raw-cel-1156922829 22.3 99.6 E-MEXP-807-raw-cel-1173273252 21.5 99.6 E-MEXP-828-raw-cel-1156922708 21.2 99.6 E-MEXP-828-raw-cel-1156922731 21.2 99.6 E-MEXP-546-raw-cel-863289424 20.4 99.6 GSM176876 AWP_AL_Txed_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress 19.4 99.6 E-MEXP-828-raw-cel-1156922485 19.3 99.6 E-MEXP-828-raw-cel-1156922750 18.5 99.5 E-MEXP-807-raw-cel-1173273088 18.4 99.5 E-MEXP-828-raw-cel-1156922509 18.1 99.5 E-MEXP-828-raw-cel-1156922905 17.7 99.5 E-MEXP-546-raw-cel-863289532 17.2 99.5 E-MEXP-828-raw-cel-1156922846 17.0 99.5 E-MEXP-807-raw-cel-1173273170 17.0 99.5 E-MEXP-828-raw-cel-1156922772 16.6 99.5 E-MEXP-828-raw-cel-1156922296 15.9 99.5 E-MEXP-828-raw-cel-1156922467 15.7 99.5 E-MEXP-546-raw-cel-863289476 15.4 99.5 GSM133134 S1500_12H_B GSE5688 AtGenExpress: Response to sulfate limitation 15.1 99.4 E-MEXP-828-raw-cel-1156922987 15.0 99.4 E-MEXP-828-raw-cel-1156922455 14.4 99.4 GSM184552 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 13.8 99.4 E-MEXP-828-raw-cel-1156922659 13.5 99.4 GSM142730 CH001_ATH1_A009-Hampt-wsc_repeat GSE6161 Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4. 13.5 99.4 E-MEXP-828-raw-cel-1156922368 12.3 99.3 GSM133130 S0_8H_B GSE5688 AtGenExpress: Response to sulfate limitation 12.3 99.3 GSM133123 S0_24H_A GSE5688 AtGenExpress: Response to sulfate limitation 12.0 99.3 E-MEXP-807-raw-cel-1173273116 11.8 99.3 GSM133128 S0_4H_B GSE5688 AtGenExpress: Response to sulfate limitation 11.6 99.3 GSM133142 S1500_8H_B GSE5688 AtGenExpress: Response to sulfate limitation 11.5 99.3 GSM133129 S0_8H_A GSE5688 AtGenExpress: Response to sulfate limitation 11.5 99.3 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function 11.5 99.3 GSM133133 S1500_12H_A GSE5688 AtGenExpress: Response to sulfate limitation 11.4 99.3 E-MEXP-828-raw-cel-1156922891 11.0 99.2 GSM142731 CH001_ATH1_A010-Hampt-akc GSE6161 Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4. 10.8 99.2 GSM157310 Gan_1-6_mutant-nitrate-continuous(ANC)_Rep1_ATH1 GSE6824 Identification of genes involved in nutritional regulation of root architecture 10.7 99.2 GSM133135 S1500_24H_A GSE5688 AtGenExpress: Response to sulfate limitation 10.7 99.2 GSM133121 S0_12H_A GSE5688 AtGenExpress: Response to sulfate limitation 10.5 99.2 GSM157309 Gan_1-5_wildtype-nitrate-continuous(WNC)_Rep1_ATH1 GSE6824 Identification of genes involved in nutritional regulation of root architecture 10.5 99.2 GSM205428 met1-3_leaf_fourth-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 10.4 99.2 E-MEXP-828-raw-cel-1156922533 10.3 99.2 GSM205432 Col_ leaf_ wildtype_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation 10.2 99.2 E-MEXP-807-raw-cel-1173273060 9.9 99.1 GSM176879 AWP_Control_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress 9.8 99.1 GSM142729 CH001_ATH1_A008-Hampt-c1b GSE6161 Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4. 9.6 99.1 GSM133137 S1500_2H_A GSE5688 AtGenExpress: Response to sulfate limitation 9.3 99.1 GSM218595 Whole roots 3.5hr KNO3 treated then frozen, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root 9.1 99.1 GSM157305 Gan_1-1_wildtype-nitrate-minus(WNM)_Rep1_ATH1 GSE6824 Identification of genes involved in nutritional regulation of root architecture 9.1 99.1 GSM128719 Pieterse_1-5_avrPstDC3000-12h_Rep1_ATH1 GSE5525 Transcriptome changes of Arabidopsis during pathogen and insect attack 8.9 99.0 E-MEXP-1797-raw-cel-1669768048 8.8 99.0 GSM133138 S1500_2H_B GSE5688 AtGenExpress: Response to sulfate limitation 8.6 99.0 GSM157306 Gan_1-3_wildtype-nitrate-minus(WNM)_Rep2_ATH1 GSE6824 Identification of genes involved in nutritional regulation of root architecture
: Transcription factor, 
: Binding protein, 
: Enzyme protein, 
: Other protein
: VF over 0.50, 
: over 0.25, 
