Co-expression analysis

Gene ID At1g18680
Gene name HNH endonuclease domain-containing protein
Module size 79 genes
NF 0.19
%ile 16.2



Co-expression network

pink confeito: Transcription factor, green bicone: Binding protein, red cone: Enzyme protein, blue sphere: Other protein
large node: VF over 0.50, middle node: over 0.25, small node: below 0.25



Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
1.00100.01.00At1g18680838449HNH endonuclease domain-containing proteinF:endonuclease activity, nucleic acid binding;P:N-terminal protein myristoylation;C:chloroplast;POBO.I.H.G.S.X.
0.3439.80.82At3g59810825150small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativeF:molecular_function unknown;P:unknown;C:small nucleolar ribonucleoprotein complex, nucleus;AMFOPO.I.H.G.S.X.
0.3235.70.82At3g57785824948unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, respiratory chain complex I;PFMO.I.H.G.S.X.
0.3133.80.81At5g54760835566eukaryotic translation initiation factor SUI1, putativeF:translation initiation factor activity;P:translational initiation, translation;C:cellular_component unknown;MPFOAVBO.I.H.G.S.X.
0.2930.30.81At2g29590817508thioesterase family proteinF:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;PMFOO.I.H.G.S.X.
0.2830.30.80At5g17840831652chaperone protein dnaJ-relatedF:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast;POBMO.I.H.G.S.X.
0.2830.30.81At5g63670836487SPT42 (SPT4 HOMOLOG 2)F:positive transcription elongation factor activity, zinc ion binding;P:positive regulation of transcription, N-terminal protein myristoylation;C:nucleus;MFOPO.I.H.G.S.X.
0.2830.30.80At2g41530818751SFGH (S-FORMYLGLUTATHIONE HYDROLASE)Encodes a protein with S-formylglutathione hydrolase activity.O.I.H.G.S.X.
0.2830.30.81At2g20930816627-F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:intracellular;MFOPO.I.H.G.S.X.
0.2726.20.81At5g42190834224ASK2 (ARABIDOPSIS SKP1-LIKE 2)Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.O.I.H.G.S.X.
0.2726.20.81At4g10100826601CNX7molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.O.I.H.G.S.X.
0.2726.20.82At5g08335830731ATSTE14BEncodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.O.I.H.G.S.X.
0.2726.20.80At5g02150831805bindingF:binding;P:unknown;C:cellular_component unknown;MFPOO.I.H.G.S.X.
0.2726.20.81At3g10850820255GLY2glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, completeO.I.H.G.S.X.
0.2624.40.80At5g67490836885unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFO.I.H.G.S.X.
0.2624.40.81At1g48170841236unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.H.G.S.X.
0.2624.40.80At2g28430817391unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.2624.40.82At5g59880836110ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)Encodes actin depolymerizing factor 3 (ADF3).O.I.H.G.S.X.
0.2624.40.80At5g27830832845-F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;MOPO.I.H.G.S.X.
0.2522.60.82At3g05000819661transport protein particle (TRAPP) component Bet3 family proteinF:transporter activity;P:pollen tube development;C:cellular_component unknown;MFOPO.I.H.G.S.X.
0.2522.60.80At2g23090816839unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOO.I.H.G.S.X.
0.2522.60.80At5g01650831707macrophage migration inhibitory factor family protein / MIF family proteinF:molecular_function unknown;P:inflammatory response, response to other organism;C:chloroplast;MOBPFO.I.H.G.S.X.
0.2522.60.80At5g19030832022RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBAO.I.H.G.S.X.
0.2522.60.80At5g62980836418dihydroneopterin aldolase, putativeF:dihydroneopterin aldolase activity;P:folic acid and derivative metabolic process;C:cellular_component unknown;BOPAO.I.H.G.S.X.
0.2522.60.80At1g06130837122GLX2-4 (glyoxalase 2-4)F:hydrolase activity, hydroxyacylglutathione hydrolase activity, zinc ion binding;P:methylglyoxal catabolic process to D-lactate;C:chloroplast;BOMAFPO.I.H.G.S.X.
0.2420.70.81At5g27720832834emb1644 (embryo defective 1644)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:small nucleolar ribonucleoprotein complex, nucleus;MFOPBVO.I.H.G.S.X.
0.2217.50.81At2g26970817238exonuclease family proteinF:exonuclease activity, nucleic acid binding;P:biological_process unknown;C:endomembrane system, intracellular;BOMFPVO.I.H.G.S.X.
0.2217.50.81At1g33990840296MES14 (METHYL ESTERASE 14)Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.O.I.H.G.S.X.
0.2217.50.81At3g12260820406complex 1 family protein / LVR family proteinF:catalytic activity;P:unknown;C:mitochondrion, respiratory chain complex I, membrane;MFPOO.I.H.G.S.X.
0.2115.80.81At3g03070821133NADH-ubiquinone oxidoreductase-relatedF:unknown;P:unknown;C:mitochondrion;MFPOO.I.H.G.S.X.
0.2115.80.80At1g49170841340unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BMOPFAO.I.H.G.S.X.
0.2115.80.81At3g08610820008unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, respiratory chain complex I;PO.I.H.G.S.X.
0.2115.80.80At3g12290820409tetrahydrofolate dehydrogenase/cyclohydrolase, putativeF:binding, catalytic activity;P:folic acid and derivative biosynthetic process, metabolic process;C:chloroplast;OBMFPAO.I.H.G.S.X.
0.2115.80.81At1g59830842276PP2A-1Encodes one of two isoforms of the catalytic subunit of protein phosphatase 2A.O.I.H.G.S.X.
0.2115.80.81At3g08780820025unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOO.I.H.G.S.X.
0.2014.40.80At4g31720829300TAFII15 (TBP-ASSOCIATED FACTOR II 15)Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15)O.I.H.G.S.X.
0.2014.40.81At2g35795818152DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding;C:cellular_component unknown;OMFBPVO.I.H.G.S.X.
0.1912.70.80At5g63480836467unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBO.I.H.G.S.X.
0.1912.70.81At5g14680831320universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAMOFO.I.H.G.S.X.
0.1912.70.80At2g19790816498clathrin adaptor complex small chain family proteinF:protein transporter activity, protein binding;P:intracellular protein transport, transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin vesicle coat;MOFPO.I.H.G.S.X.
0.1912.70.80At1g28510839751-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.H.G.S.X.
0.1912.70.81At5g58740835988nuclear movement family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFO.I.H.G.S.X.
0.1811.40.79At1g61780842475postsynaptic protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.H.G.S.X.
0.1811.40.80At1g78040844139pollen Ole e 1 allergen and extensin family proteinF:molecular_function unknown;P:in 10 processes;C:endomembrane system;PO.I.H.G.S.X.
0.1811.40.80At5g58240835936bis(5'-adenosyl)-triphosphatase, putativeEncodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.O.I.H.G.S.X.
0.1811.40.81At1g26630839203FBR12 (FUMONISIN B1-RESISTANT12)Eukaryotic translation initiation factor 5A-2. Involved in programmed cell death triggered as a response to pseudomonas syringae infection. Loss of function mutants are more resistant to infection.O.I.H.G.S.X.
0.1811.40.80At5g04260830305WCRKC2 (WCRKC THIOREDOXIN 2)Encodes a thioredoxin (WCRKC2) localized in chloroplast stroma. Contains a WCRKC motif.O.I.H.G.S.X.
0.1811.40.81At5g58220835934TTL (Transthyretin-Like protein)F:steroid binding;P:regulation of cell growth by extracellular stimulus, brassinosteroid mediated signaling;C:extrinsic to internal side of plasma membrane, peroxisome;BOMFPAO.I.H.G.S.X.
0.1710.20.81At3g15660820809GRX4 (GLUTAREDOXIN 4)F:metal ion binding;P:cell redox homeostasis;C:mitochondrion;OBMPFAO.I.H.G.S.X.
0.1710.20.81At5g08060830700unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POO.I.H.G.S.X.
0.1710.20.80At1g80630844402leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPFOBO.I.H.G.S.X.
0.1710.20.81At3g58470825016methyltransferase/ nucleic acid bindingF:methyltransferase activity, nucleic acid binding;P:methylation;C:cellular_component unknown;MFPOO.I.H.G.S.X.
0.1710.20.80At4g15520827225tRNA/rRNA methyltransferase (SpoU) family proteinF:RNA binding, RNA methyltransferase activity;P:RNA processing;C:cellular_component unknown;BOMPAO.I.H.G.S.X.
0.168.80.80At1g55160841959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, plastid;PO.I.H.G.S.X.
0.168.80.80At3g51610824324unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;POO.I.H.G.S.X.
0.168.80.80At2g47170819330ARF1A1CGene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.O.I.H.G.S.X.
0.168.80.80At1g26550839195peptidyl-prolyl cis-trans isomerase PPIC-type family proteinF:isomerase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPAO.I.H.G.S.X.
0.146.80.80At3g51790824342ATG1 (ARABIDOPSIS TRANSMEMBRANE PROTEIN G1P-RELATED 1)putative transmembrane protein G1p (AtG1) mRNA, completeO.I.H.G.S.X.
0.146.80.80At1g30825839965DIS2 (DISTORTED TRICHOMES 2)Involved in trichome maturation. mutant displays enlarged trichomesO.I.H.G.S.X.
0.146.80.80At3g19220821456SCO2 (SNOWY COTYLEDON 2)Encodes a zinc finger protein that is similar to DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.O.I.H.G.S.X.
0.146.80.82At4g24730828575calcineurin-like phosphoesterase family proteinF:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBMOO.I.H.G.S.X.
0.146.80.82At3g13550820557FUS9 (FUSCA 9)Encodes a protein similar to ubiquitin-conjugating enzyme (E2) variant proteins (UEV); lacks catalytic cysteine residue found in ubiquitin-conjugating enzyme E2. Represses photomorphogenesis and induces skotomorphogenesis in the dark.O.I.H.G.S.X.
0.146.80.80At1g53530841788signal peptidase I family proteinF:serine-type peptidase activity, peptidase activity;P:proteolysis;C:membrane;BOMFPO.I.H.G.S.X.
0.146.80.80At4g02580828130NADH-ubiquinone oxidoreductase 24 kDa subunit, putativeF:electron carrier activity, NAD or NADH binding, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity;P:response to oxidative stress, mitochondrial electron transport, NADH to ubiquinone;C:mitochondrion, respiratory chain complex I;BOMFPAO.I.H.G.S.X.
0.146.80.82At5g08340830732riboflavin biosynthesis protein-relatedF:FMN adenylyltransferase activity;P:riboflavin biosynthetic process;C:cellular_component unknown;BOPO.I.H.G.S.X.
0.146.80.81At2g35320818099ATEYA (Arabidopsis thaliana EYES ABSENT homolog)homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent.O.I.H.G.S.X.
0.146.80.82At2g46090819217diacylglycerol kinase family proteinEncodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs.O.I.H.G.S.X.
0.146.80.80At3g04500819606RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:unknown;MPFOBO.I.H.G.S.X.
0.135.80.80At1g20890838682unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOO.I.H.G.S.X.
0.135.80.81At5g59380836057MBD6Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.O.I.H.G.S.X.
0.135.80.81At3g07300819918eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinF:GTP binding, translation initiation factor activity;P:translational initiation, cellular metabolic process;C:eukaryotic translation initiation factor 2B complex;OBMFAPO.I.H.G.S.X.
0.124.90.80At3g60590825230unknown proteinF:unknown;P:unknown;C:chloroplast, chloroplast inner membrane, chloroplast envelope;PBOO.I.H.G.S.X.
0.114.10.79At3g62840825459-F:molecular_function unknown;P:unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MFOPAO.I.H.G.S.X.
0.114.10.80At5g11760831048unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OFPO.I.H.G.S.X.
0.114.10.79At4g12230826831esterase/lipase/thioesterase family proteinF:catalytic activity;P:biological_process unknown;C:cellular_component unknown;BOMPAFVO.I.H.G.S.X.
0.114.10.80At2g01060814630myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POBO.I.H.G.S.X.
0.103.40.80At1g13870837946DRL1 (DEFORMED ROOTS AND LEAVES 1)Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots.O.I.H.G.S.X.
0.103.40.80At3g06960819881PDE320 (PIGMENT DEFECTIVE 320)F:molecular_function unknown;P:acylglycerol transport;C:endoplasmic reticulum, chloroplast;PO.I.H.G.S.X.
0.082.30.80At5g49940835057NFU2 (NIFU-LIKE PROTEIN 2)Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast.O.I.H.G.S.X.

Click More genes

Link to AtGenExpress Visualization Tool



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
55.099.8GSM205426met1-3_leaf_second-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
54.599.8GSM205364met1-3_leaf_second-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
52.899.8GSM205430met1-3_leaf_fourth-selfed generation_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
46.899.8GSM205428met1-3_leaf_fourth-selfed generation_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
43.099.8GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
33.499.7GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
33.499.7E-ATMX-35-raw-cel-1574334832
32.099.7GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
31.499.7GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
31.299.7GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.999.7GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
28.999.7GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.499.7GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
28.499.7GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
26.799.7GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
26.299.7GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
25.999.7GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
25.799.7GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
25.699.7GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
25.499.6GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
25.399.6GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.999.6GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
24.699.6GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1Link to GEO
24.599.6GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis rootLink to GEO
23.499.6GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1Link to GEO
21.999.6GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
18.599.5E-ATMX-35-raw-cel-1574334816
15.799.5GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG MethylationLink to GEO
15.799.5GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
13.399.4GSM133758Lindsey_1-11_heart-stage-root_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
12.699.3E-ATMX-35-raw-cel-1574334800
9.999.1GSM133763Lindsey_1-15_torpedo-cotyledon_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissuesLink to GEO
9.899.1GSM176876AWP_AL_Txed_1GSE7334Microarray Analysis of Arabidopsis Genome Response to Aluminum StressLink to GEO
9.799.1GSM311284Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stageLink to GEO
9.599.1GSM266668Arabidopsis, root cells, columella root cap, -Fe, replicate 3GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatmentLink to GEO
9.199.1GSM184894Arabidopsis, root cells, columella root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with saltLink to GEO
8.799.0GSM284397Arabidopsis GGSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO
8.699.0GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular functionLink to GEO
8.699.0GSM284398Arabidopsis GGSc2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.Link to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0482GO:0019243The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into D-lactate via the intermediate S-lactoyl-glutathione. Glutathione is used in the first step of the pathway and then regenerated in the second step.Link to AmiGO
0.0403GO:0006413The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.Link to AmiGO
0.0332GO:0009658A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.Link to AmiGO

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG
0.036400190Oxidative phosphorylationLink to KEGG PATHWAY
0.031203018RNA degradationLink to KEGG PATHWAY
0.021100670One carbon pool by folateLink to KEGG PATHWAY

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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