CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At1g14070

Gene name FUT7

Module size 25 genes

NF 0.36

%ile 49.3

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
0.52 67.4 1.00 At1g14070 837967 FUT7 member of Xyloglucan fucosyltransferase family O.I. H.G. S.X.
0.50 65.3 0.75 At5g48290 834882 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBF O.I. H.G. S.X.
0.49 63.5 0.77 At5g51160 835190 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. H.G. S.X.
0.49 63.5 0.75 At4g05200 825868 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. H.G. S.X.
0.48 62.5 0.79 At3g26440 822248 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. H.G. S.X.
0.48 62.5 0.78 At4g21230 827872 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. H.G. S.X.
0.46 59.8 0.77 At5g06300 830518 carboxy-lyase F:carboxy-lyase activity;P:metabolic process;C:unknown;BOPFMA O.I. H.G. S.X.
0.46 59.8 0.75 At1g47480 841155 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV O.I. H.G. S.X.
0.45 58.3 0.76 At5g50760 835148 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. H.G. S.X.
0.43 55.3 0.75 At2g35000 818064 zinc finger (C3HC4-type RING finger) family protein E3 ligase-like protein induced by chitin oligomers. O.I. H.G. S.X.
0.42 53.9 0.77 At1g09740 837502 ethylene-responsive protein, putative F:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFM O.I. H.G. S.X.
0.40 50.8 0.75 At1g50560 841477 CYP705A25 member of CYP705A O.I. H.G. S.X.
0.39 48.4 0.76 At1g35260 840415 MLP165 (MLP-LIKE PROTEIN 165) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. H.G. S.X.
0.38 46.7 0.76 At1g35250 840414 thioesterase family protein F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPA O.I. H.G. S.X.
0.36 43.6 0.76 At5g06839 830575 bZIP family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF O.I. H.G. S.X.
0.35 41.6 0.75 At1g70300 843366 KUP6 potassium transporter O.I. H.G. S.X.
0.33 38.1 0.75 At4g20110 827757 vacuolar sorting receptor, putative F:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFA O.I. H.G. S.X.
0.32 35.7 0.75 At5g65210 836646 TGA1 F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POM O.I. H.G. S.X.
0.30 32.1 0.75 At1g29280 839802 WRKY65 member of WRKY Transcription Factor; Group II-e O.I. H.G. S.X.
0.28 30.3 0.77 At2g36380 818211 PDR6 F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV O.I. H.G. S.X.
0.26 24.4 0.75 At3g58710 825040 WRKY69 member of WRKY Transcription Factor; Group II-e O.I. H.G. S.X.
0.26 24.4 0.76 At5g37740 833752 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO O.I. H.G. S.X.
0.24 20.7 0.81 At4g39270 830083 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. H.G. S.X.
0.24 20.7 0.77 At4g15093 827174 catalytic LigB subunit of aromatic ring-opening dioxygenase family F:electron carrier activity, oxidoreductase activity, ferrous iron binding, zinc ion binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;P:oxidation reduction, cellular aromatic compound metabolic process;C:cellular_component unknown;BFOPAM O.I. H.G. S.X.
0.20 14.4 0.79 At4g15500 827222 UGT84A4 Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity. O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.52	67.4	1.00	At1g14070	837967	FUT7	member of Xyloglucan fucosyltransferase family	O.I.	H.G.	S.X.
0.50	65.3	0.75	At5g48290	834882	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBF	O.I.	H.G.	S.X.
0.49	63.5	0.77	At5g51160	835190	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	H.G.	S.X.
0.49	63.5	0.75	At4g05200	825868	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	H.G.	S.X.
0.48	62.5	0.79	At3g26440	822248	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	H.G.	S.X.
0.48	62.5	0.78	At4g21230	827872	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	H.G.	S.X.
0.46	59.8	0.77	At5g06300	830518	carboxy-lyase	F:carboxy-lyase activity;P:metabolic process;C:unknown;BOPFMA	O.I.	H.G.	S.X.
0.46	59.8	0.75	At1g47480	841155	hydrolase	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	H.G.	S.X.
0.45	58.3	0.76	At5g50760	835148	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	H.G.	S.X.
0.43	55.3	0.75	At2g35000	818064	zinc finger (C3HC4-type RING finger) family protein	E3 ligase-like protein induced by chitin oligomers.	O.I.	H.G.	S.X.
0.42	53.9	0.77	At1g09740	837502	ethylene-responsive protein, putative	F:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFM	O.I.	H.G.	S.X.
0.40	50.8	0.75	At1g50560	841477	CYP705A25	member of CYP705A	O.I.	H.G.	S.X.
0.39	48.4	0.76	At1g35260	840415	MLP165 (MLP-LIKE PROTEIN 165)	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	H.G.	S.X.
0.38	46.7	0.76	At1g35250	840414	thioesterase family protein	F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPA	O.I.	H.G.	S.X.
0.36	43.6	0.76	At5g06839	830575	bZIP family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF	O.I.	H.G.	S.X.
0.35	41.6	0.75	At1g70300	843366	KUP6	potassium transporter	O.I.	H.G.	S.X.
0.33	38.1	0.75	At4g20110	827757	vacuolar sorting receptor, putative	F:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFA	O.I.	H.G.	S.X.
0.32	35.7	0.75	At5g65210	836646	TGA1	F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POM	O.I.	H.G.	S.X.
0.30	32.1	0.75	At1g29280	839802	WRKY65	member of WRKY Transcription Factor; Group II-e	O.I.	H.G.	S.X.
0.28	30.3	0.77	At2g36380	818211	PDR6	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV	O.I.	H.G.	S.X.
0.26	24.4	0.75	At3g58710	825040	WRKY69	member of WRKY Transcription Factor; Group II-e	O.I.	H.G.	S.X.
0.26	24.4	0.76	At5g37740	833752	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO	O.I.	H.G.	S.X.
0.24	20.7	0.81	At4g39270	830083	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	H.G.	S.X.
0.24	20.7	0.77	At4g15093	827174	catalytic LigB subunit of aromatic ring-opening dioxygenase family	F:electron carrier activity, oxidoreductase activity, ferrous iron binding, zinc ion binding, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;P:oxidation reduction, cellular aromatic compound metabolic process;C:cellular_component unknown;BFOPAM	O.I.	H.G.	S.X.
0.20	14.4	0.79	At4g15500	827222	UGT84A4	Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.	O.I.	H.G.	S.X.

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
68.3 99.9 GSM133117 RIKEN-YAMAUCHI1A GSE5687 AtGenExpress: Different temperature treatment of seeds
56.4 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
39.2 99.8 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
33.1 99.7 E-MEXP-1138-raw-cel-1432773322
32.9 99.7 E-MEXP-1138-raw-cel-1432773258
30.8 99.7 E-MEXP-1138-raw-cel-1432773290
27.8 99.7 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.2 99.7 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.7 99.7 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.3 99.6 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.8 99.6 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.8 99.6 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.5 99.6 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.3 99.6 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
23.9 99.6 GSM253646 Low_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
23.6 99.6 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.6 99.6 GSM143299 High_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.6 99.6 GSM253645 High_Mo_seg_pool_Ler_col_F2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
23.2 99.6 GSM143306 High_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
22.8 99.6 GSM253649 Col-0-2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
22.8 99.6 GSM253648 Col-0-1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
22.3 99.6 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
21.6 99.6 GSM253647 Col-0 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
19.9 99.6 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
19.1 99.6 GSM284394 Arabidopsis GCE3 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
16.3 99.5 GSM311283 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
15.8 99.5 GSM284392 Arabidopsis GCE1 GSE11262 Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
15.5 99.5 E-MEXP-265-raw-cel-414618394
15.3 99.4 GSM205426 met1-3_leaf_second-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
15.1 99.4 GSM176876 AWP_AL_Txed_1 GSE7334 Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
14.8 99.4 GSM131656 ATGE_27_B GSE5633 AtGenExpress: Developmental series (shoots and stems)
14.7 99.4 GSM226530 LCOLUMELLASB GSE8934 A high resolution organ expression map reveals novel expression patterns and predicts cellular function
14.6 99.4 GSM131655 ATGE_27_A GSE5633 AtGenExpress: Developmental series (shoots and stems)
14.6 99.4 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
13.6 99.4 GSM131657 ATGE_27_C GSE5633 AtGenExpress: Developmental series (shoots and stems)
13.3 99.4 E-MEXP-265-raw-cel-414618291
13.1 99.4 GSM205364 met1-3_leaf_second-selfed generation_rep01 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
11.8 99.3 GSM311280 Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
11.7 99.3 GSM133753 Turner_A-7-Turne-WT-Base1_SLD GSE5729 Role of COV in vascular patterning
11.5 99.3 E-MEXP-98-raw-cel-320188969
10.7 99.2 E-MEXP-265-raw-cel-414618491
10.4 99.2 GSM239254 CaMV::DME stamen GSE9408 Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
9.6 99.1 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.5 99.1 E-MEXP-509-raw-cel-829148561
9.5 99.1 GSM205430 met1-3_leaf_fourth-selfed generation_rep02 GSE8279 Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
9.1 99.1 GSM311284 Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2 GSE12402 Expression data from Arabidopsis seed compartments at the pre-globular stage
8.9 99.0 E-MEXP-98-raw-cel-320188914
8.7 99.0 E-MEXP-1725-raw-cel-1669614582

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
68.3	99.9	GSM133117	RIKEN-YAMAUCHI1A	GSE5687	AtGenExpress: Different temperature treatment of seeds
56.4	99.8	GSM184556	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
39.2	99.8	GSM184537	Whole roots 2hr KCl control treated then frozen, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
33.1	99.7	E-MEXP-1138-raw-cel-1432773322
32.9	99.7	E-MEXP-1138-raw-cel-1432773258
30.8	99.7	E-MEXP-1138-raw-cel-1432773290
27.8	99.7	GSM143301	Ts_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
27.2	99.7	GSM143302	Ts_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.7	99.7	GSM143298	Low_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
25.3	99.6	GSM143308	Tsu_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.8	99.6	GSM143310	Tsu_genomic_hyb_1	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.8	99.6	GSM143309	Tsu_genomic_hyb_2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.5	99.6	GSM143300	Ts_genomic_hyb_3	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
24.3	99.6	GSM253650	Ler 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
23.9	99.6	GSM253646	Low_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
23.6	99.6	GSM143307	Low_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.6	99.6	GSM143299	High_Na_seg_pool_ts_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
23.6	99.6	GSM253645	High_Mo_seg_pool_Ler_col_F2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
23.2	99.6	GSM143306	High_Na_seg_pool_tsu_col_F2	GSE6203	Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
22.8	99.6	GSM253649	Col-0-2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
22.8	99.6	GSM253648	Col-0-1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
22.3	99.6	GSM253651	Ler 1	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
21.6	99.6	GSM253647	Col-0 3	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
19.9	99.6	GSM253652	Ler 2	GSE10039	Low_Mo_Arabidopsis_mapping_MOT1
19.1	99.6	GSM284394	Arabidopsis GCE3	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
16.3	99.5	GSM311283	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 1	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
15.8	99.5	GSM284392	Arabidopsis GCE1	GSE11262	Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
15.5	99.5	E-MEXP-265-raw-cel-414618394
15.3	99.4	GSM205426	met1-3_leaf_second-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
15.1	99.4	GSM176876	AWP_AL_Txed_1	GSE7334	Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress
14.8	99.4	GSM131656	ATGE_27_B	GSE5633	AtGenExpress: Developmental series (shoots and stems)
14.7	99.4	GSM226530	LCOLUMELLASB	GSE8934	A high resolution organ expression map reveals novel expression patterns and predicts cellular function
14.6	99.4	GSM131655	ATGE_27_A	GSE5633	AtGenExpress: Developmental series (shoots and stems)
14.6	99.4	GSM184551	Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
13.6	99.4	GSM131657	ATGE_27_C	GSE5633	AtGenExpress: Developmental series (shoots and stems)
13.3	99.4	E-MEXP-265-raw-cel-414618291
13.1	99.4	GSM205364	met1-3_leaf_second-selfed generation_rep01	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
11.8	99.3	GSM311280	Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
11.7	99.3	GSM133753	Turner_A-7-Turne-WT-Base1_SLD	GSE5729	Role of COV in vascular patterning
11.5	99.3	E-MEXP-98-raw-cel-320188969
10.7	99.2	E-MEXP-265-raw-cel-414618491
10.4	99.2	GSM239254	CaMV::DME stamen	GSE9408	Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis
9.6	99.1	GSM133762	Lindsey_1-14_torpedo-root_Rep1_ATH1	GSE5730	Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.5	99.1	E-MEXP-509-raw-cel-829148561
9.5	99.1	GSM205430	met1-3_leaf_fourth-selfed generation_rep02	GSE8279	Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
9.1	99.1	GSM311284	Laser capture microdissected (LCM) general seed coat at the pre-globular stage, biological replicate 2	GSE12402	Expression data from Arabidopsis seed compartments at the pre-globular stage
8.9	99.0	E-MEXP-98-raw-cel-320188914
8.7	99.0	E-MEXP-1725-raw-cel-1669614582

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.069 1 GO:0006725 The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
0.050 1 GO:0042546 The process by which a cell wall is synthesized, aggregates, and bonds together. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
0.045 1 GO:0006623 The process of directing proteins towards the vacuole, usually using signals contained within the protein.

SF	Genes	GO ID	Process Name
0.069	1	GO:0006725	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
0.050	1	GO:0042546	The process by which a cell wall is synthesized, aggregates, and bonds together. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.
0.045	1	GO:0006623	The process of directing proteins towards the vacuole, usually using signals contained within the protein.

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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Gene ID	At1g14070
Gene name	FUT7
Module size	25 genes
NF	0.36
%ile	49.3

Co-expression analysis

Gene ID At1g14070 Gene name FUT7 Module size 25 genes NF 0.36 %ile 49.3

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgareOryza_sativaPopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At1g14070

Gene name FUT7

Module size 25 genes

NF 0.36

%ile 49.3

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes KEGG ID Pathway name Link to KEGG

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays