CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID At1g08930

Gene name ERD6 (EARLY RESPONSE TO DEHYDRATION 6)

Module size 6 genes

NF 0.61

%ile 82.0

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. O.I. H.G. S.X. Other DB
0.91 95.6 1.00 At1g08930 837414 ERD6 (EARLY RESPONSE TO DEHYDRATION 6) encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold. O.I. H.G. S.X.
0.83 91.4 0.89 At4g38550 830012 - F:unknown;P:unknown;C:chloroplast;MFPOBVA O.I. H.G. S.X.
0.57 73.8 0.91 At1g59870 842281 PEN3 (PENETRATION 3) ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance. O.I. H.G. S.X.
0.57 73.8 0.91 At2g44490 819056 PEN2 (PENETRATION 2) Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance. O.I. H.G. S.X.
0.43 55.3 0.90 At3g11820 820355 SYP121 (SYNTAXIN OF PLANTS 121) Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance. O.I. H.G. S.X.
0.25 22.6 0.89 At5g61210 836242 SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33) membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation O.I. H.G. S.X.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	O.I.	H.G.	S.X.
0.91	95.6	1.00	At1g08930	837414	ERD6 (EARLY RESPONSE TO DEHYDRATION 6)	encodes a putative sucrose transporter whose gene expression is induced by dehydration and cold.	O.I.	H.G.	S.X.
0.83	91.4	0.89	At4g38550	830012	-	F:unknown;P:unknown;C:chloroplast;MFPOBVA	O.I.	H.G.	S.X.
0.57	73.8	0.91	At1g59870	842281	PEN3 (PENETRATION 3)	ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid–dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.	O.I.	H.G.	S.X.
0.57	73.8	0.91	At2g44490	819056	PEN2 (PENETRATION 2)	Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance.	O.I.	H.G.	S.X.
0.43	55.3	0.90	At3g11820	820355	SYP121 (SYNTAXIN OF PLANTS 121)	Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.	O.I.	H.G.	S.X.
0.25	22.6	0.89	At5g61210	836242	SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)	membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation	O.I.	H.G.	S.X.

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.6 99.6 GSM75521 slr-1 6h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
17.8 99.5 GSM184509 Pericycle root cells 2hr continuous KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
16.8 99.5 GSM290753 root - 01% oxygen - 2h - E GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
16.6 99.5 GSM131237 AtGen_6-0221_Control-Roots-1.0h_Rep1 GSE5620 AtGenExpress: Stress Treatments (Control plants)
15.2 99.4 GSM75520 slr-1 2h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
11.3 99.3 E-MEXP-807-raw-cel-1173273144
11.1 99.2 GSM75513 Col-0 2h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
11.0 99.2 E-MEXP-807-raw-cel-1173273252
10.0 99.2 GSM75518 slr-1 6h NAA replicate 1 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
10.0 99.2 GSM133894 Schroeder_1-12_JS44-starve-96h_Rep1_ATH1 GSE5744 Response to potassium starvation in roots
9.4 99.1 GSM75509 Col-0 2h NAA replicate 1 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
9.3 99.1 GSM75517 slr-1 2h NAA replicate 1 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title
22.6	99.6	GSM75521	slr-1 6h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
17.8	99.5	GSM184509	Pericycle root cells 2hr continuous KNO3 treated, biological rep1	GSE7631	Cell-specific nitrogen responses in the Arabidopsis root
16.8	99.5	GSM290753	root - 01% oxygen - 2h - E	GSE11558	transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
16.6	99.5	GSM131237	AtGen_6-0221_Control-Roots-1.0h_Rep1	GSE5620	AtGenExpress: Stress Treatments (Control plants)
15.2	99.4	GSM75520	slr-1 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
11.3	99.3	E-MEXP-807-raw-cel-1173273144
11.1	99.2	GSM75513	Col-0 2h NAA replicate 2	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
11.0	99.2	E-MEXP-807-raw-cel-1173273252
10.0	99.2	GSM75518	slr-1 6h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
10.0	99.2	GSM133894	Schroeder_1-12_JS44-starve-96h_Rep1_ATH1	GSE5744	Response to potassium starvation in roots
9.4	99.1	GSM75509	Col-0 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation
9.3	99.1	GSM75517	slr-1 2h NAA replicate 1	GSE3350	SLR/IAA14-dependent auxin induced lateral root initiation

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO
0.444 2 GO:0042344 The chemical reactions and pathways resulting in the breakdown of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.
0.250 1 GO:0051245 Any process that stops, prevents, or reduces the rate of the cellular defense response.
0.222 1 GO:0010363 Any endogenous process that modulates the frequency, rate or extent of the plant hypersensitive response.

SF	Genes	GO ID	Process Name
0.444	2	GO:0042344	The chemical reactions and pathways resulting in the breakdown of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.
0.250	1	GO:0051245	Any process that stops, prevents, or reduces the rate of the cellular defense response.
0.222	1	GO:0010363	Any endogenous process that modulates the frequency, rate or extent of the plant hypersensitive response.

KEGG PATHWAY inferred to related to the module

SF Genes KEGG ID Pathway name Link to KEGG
0.074 2 04130 SNARE interactions in vesicular transport
0.047 1 00380 Tryptophan metabolism

SF	Genes	KEGG ID	Pathway name	Link to KEGG
0.074	2	04130	SNARE interactions in vesicular transport
0.047	1	00380	Tryptophan metabolism

Inter-species module comparison

A co-expression module including the rice gene, Os05g0567700, orthologous to the query gene, At1g08930

VF %ile Gene ID Repr. ID Gene Name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.97 99.9 Os05g0567700 - - Integral membrane protein 2e-5 At1g75220 integral membrane protein, putative O.I. H.G. S.X.
0.44 58.1 Os02g0166600 - - Conserved hypothetical protein 5e-2 At5g39540 - O.I. H.G. S.X.
0.42 53.9 Os03g0639600 - - Zinc-finger protein Lsd1 4e-5 At4g20380 zinc finger protein (LSD1) O.I. H.G. S.X.
0.41 52.4 Os03g0843100 - - Ras-related protein Rab-11B 4e-11 At1g09630 ATRAB11C (ARABIDOPSIS RAB GTPASE 11C) O.I. H.G. S.X.
0.41 52.4 Os07g0553900 - - Hypothetical protein 1e+0 At4g16240 unknown protein O.I. H.G. S.X.
0.38 46.9 Os01g0959800 - - Phosphatidylserine decarboxylase 1e-9 At4g25970 PSD3 (phosphatidylserine decarboxylase 3) O.I. H.G. S.X.
0.38 46.9 Os06g0714200 - - Calcium/calmodulin-dependent protein kinasehomolog|CaM kinase homolog|MCK1 protein 8e-19 At2g46700 calcium-dependent protein kinase, putative / CDPK, putative O.I. H.G. S.X.
0.36 44.0 Os03g0567600 - - Protein of unknown function DUF563 family protein 1e-3 At5g58000 - O.I. H.G. S.X.
0.35 41.7 Os04g0550700 - - Conserved hypothetical protein 3e+0 At3g05560 60S ribosomal protein L22-2 (RPL22B) O.I. H.G. S.X.
0.35 41.7 Os10g0476400 - - Snf7 family protein 2e-34 At1g03950 VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3) O.I. H.G. S.X.
0.34 40.0 Os04g0451900 - - Protein phosphatase 2C-like domain containingprotein 6e-11 At1g22280 protein phosphatase 2C, putative / PP2C, putative O.I. H.G. S.X.
0.34 40.0 Os06g0102700 - - Arm repeat-containing protein 1e-6 At3g46510 PUB13 (PLANT U-BOX 13) O.I. H.G. S.X.
0.34 40.0 Os02g0750600 - - Ubiquitin domain containing protein 6e-7 At1g22050 MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR) O.I. H.G. S.X.
0.33 38.8 Os09g0557800 - - Nonaspanin (TM9SF) family protein 5e-46 At5g25100 endomembrane protein 70, putative O.I. H.G. S.X.
0.32 36.3 Os12g0596800 - - Ubiquitin interacting motif domain containingprotein 1e-12 At4g36860 zinc ion binding O.I. H.G. S.X.
0.32 36.3 Os03g0318600 - - Transcription factor HBP-1b(c38) 4e-15 At5g06950 AHBP-1B O.I. H.G. S.X.
0.30 32.7 Os11g0588300 - - Glutathione transferase AtGST 10 (EC 2.5.1.18) 2e-3 At5g41210 ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1) O.I. H.G. S.X.
0.30 32.7 Os03g0110300 - - Conserved hypothetical protein 2e-3 At2g28790 osmotin-like protein, putative O.I. H.G. S.X.
0.30 32.7 Os07g0632800 - - Protein kinase domain containing protein 1e-48 At1g14000 VIK (VH1-INTERACTING KINASE) O.I. H.G. S.X.
0.28 31.1 Os03g0808300 - - Remorin, C-terminal region domain containingprotein 2e-1 At1g05270 TraB family protein O.I. H.G. S.X.
0.27 27.5 Os04g0556300 - - Glutathione peroxidase-like protein GPX54Hv 3e-33 At4g11600 ATGPX6 (GLUTATHIONE PEROXIDASE 6) O.I. H.G. S.X.
0.27 27.5 Os11g0199700 - - - 2e-2 At1g21380 VHS domain-containing protein / GAT domain-containing protein O.I. H.G. S.X.
0.27 27.5 Os10g0400100 - - Methionyl-tRNA synthetase, class Ia domaincontaining protein 8e-51 At4g13780 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative O.I. H.G. S.X.
0.26 25.6 Os05g0564800 - - Conserved hypothetical protein 1e-3 At1g17080 unknown protein O.I. H.G. S.X.
0.25 24.1 Os02g0193800 - - ARM repeat fold domain containing protein 6e-1 At2g05117 SCRL9 (SCR-Like 9) O.I. H.G. S.X.
0.25 24.1 Os01g0780500 - - SCAMP family protein 1e-14 At2g20840 secretory carrier membrane protein (SCAMP) family protein O.I. H.G. S.X.
0.25 24.1 Os03g0215000 - - Conserved hypothetical protein 6e-14 At1g76340 integral membrane family protein O.I. H.G. S.X.
0.24 22.4 Os02g0581300 - - ASC1 (Alternaria stem canker resistance protein) 5e-8 At3g25540 LAG1 O.I. H.G. S.X.
0.24 22.4 Os04g0517400 - - Conserved hypothetical protein 5e-15 At5g18480 PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6) O.I. H.G. S.X.
0.23 21.2 Os01g0936200 - - Lipase, class 3 family protein 6e-3 At5g18630 lipase class 3 family protein O.I. H.G. S.X.
0.23 21.2 Os09g0281700 - - Ras-related protein RGP1 (GTP-binding regulatoryprotein RGP1) 1e-17 At5g47960 ATRABA4C O.I. H.G. S.X.
0.22 19.4 Os09g0490200 - - EIL3 1e-12 At1g73730 EIL3 (ETHYLENE-INSENSITIVE3-LIKE3) O.I. H.G. S.X.
0.20 16.5 Os03g0101100 - - Palmitoyl protein thioesterase family protein 6e-1 At5g47330 palmitoyl protein thioesterase family protein O.I. H.G. S.X.
0.20 16.5 Os12g0600400 - - Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)(Pyridoxal kinase- like protein SOS4) (Salt overlysensitive 4) 4e-21 At5g37850 SOS4 (SALT OVERLY SENSITIVE 4) O.I. H.G. S.X.
0.19 15.1 Os12g0636800 - - Ubiquitin-conjugating enzyme 18 (Fragment) 5e-13 At5g42990 UBC18 (ubiquitin-conjugating enzyme 18) O.I. H.G. S.X.
0.19 15.1 Os03g0638800 - - Protein kinase domain containing protein 2e-32 At3g22750 protein kinase, putative O.I. H.G. S.X.
0.19 15.1 Os08g0536000 - - Pyruvate dehydrogenase E1 beta subunit isoform 1(EC 1.2.4.1) 9e-44 At5g50850 MAB1 (MACCI-BOU) O.I. H.G. S.X.
0.19 15.1 Os06g0656500 - - - 2e-2 At3g21240 4CL2 (4-COUMARATE:COA LIGASE 2) O.I. H.G. S.X.
0.17 12.6 Os05g0102900 - - Snf7 family protein 8e-28 At3g10640 VPS60.1 O.I. H.G. S.X.
0.15 10.3 Os02g0131200 - - Glycosyl transferase, family 3 domain containingprotein 8e-8 At1g70570 anthranilate phosphoribosyltransferase, putative O.I. H.G. S.X.
0.14 9.3 Os06g0622900 - - RNA-binding region containing protein 1 (HSRNASEB)(ssDNA binding protein SEB4) (CLL-associated antigenKW-5). Splice isoform 2 4e-3 At1g78260 RNA recognition motif (RRM)-containing protein O.I. H.G. S.X.
0.14 9.3 Os11g0587500 - - RabGAP/TBC domain containing protein 4e-6 At4g27100 RAB GTPase activator O.I. H.G. S.X.
0.10 5.7 Os03g0224200 - - Response regulator receiver domain containingprotein 6e-12 At2g01760 ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14) O.I. H.G. S.X.

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.
0.97	99.9	Os05g0567700	-	-	Integral membrane protein	2e-5	At1g75220	integral membrane protein, putative	O.I.	H.G.	S.X.
0.44	58.1	Os02g0166600	-	-	Conserved hypothetical protein	5e-2	At5g39540	-	O.I.	H.G.	S.X.
0.42	53.9	Os03g0639600	-	-	Zinc-finger protein Lsd1	4e-5	At4g20380	zinc finger protein (LSD1)	O.I.	H.G.	S.X.
0.41	52.4	Os03g0843100	-	-	Ras-related protein Rab-11B	4e-11	At1g09630	ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)	O.I.	H.G.	S.X.
0.41	52.4	Os07g0553900	-	-	Hypothetical protein	1e+0	At4g16240	unknown protein	O.I.	H.G.	S.X.
0.38	46.9	Os01g0959800	-	-	Phosphatidylserine decarboxylase	1e-9	At4g25970	PSD3 (phosphatidylserine decarboxylase 3)	O.I.	H.G.	S.X.
0.38	46.9	Os06g0714200	-	-	Calcium/calmodulin-dependent protein kinasehomolog\|CaM kinase homolog\|MCK1 protein	8e-19	At2g46700	calcium-dependent protein kinase, putative / CDPK, putative	O.I.	H.G.	S.X.
0.36	44.0	Os03g0567600	-	-	Protein of unknown function DUF563 family protein	1e-3	At5g58000	-	O.I.	H.G.	S.X.
0.35	41.7	Os04g0550700	-	-	Conserved hypothetical protein	3e+0	At3g05560	60S ribosomal protein L22-2 (RPL22B)	O.I.	H.G.	S.X.
0.35	41.7	Os10g0476400	-	-	Snf7 family protein	2e-34	At1g03950	VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)	O.I.	H.G.	S.X.
0.34	40.0	Os04g0451900	-	-	Protein phosphatase 2C-like domain containingprotein	6e-11	At1g22280	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.
0.34	40.0	Os06g0102700	-	-	Arm repeat-containing protein	1e-6	At3g46510	PUB13 (PLANT U-BOX 13)	O.I.	H.G.	S.X.
0.34	40.0	Os02g0750600	-	-	Ubiquitin domain containing protein	6e-7	At1g22050	MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)	O.I.	H.G.	S.X.
0.33	38.8	Os09g0557800	-	-	Nonaspanin (TM9SF) family protein	5e-46	At5g25100	endomembrane protein 70, putative	O.I.	H.G.	S.X.
0.32	36.3	Os12g0596800	-	-	Ubiquitin interacting motif domain containingprotein	1e-12	At4g36860	zinc ion binding	O.I.	H.G.	S.X.
0.32	36.3	Os03g0318600	-	-	Transcription factor HBP-1b(c38)	4e-15	At5g06950	AHBP-1B	O.I.	H.G.	S.X.
0.30	32.7	Os11g0588300	-	-	Glutathione transferase AtGST 10 (EC 2.5.1.18)	2e-3	At5g41210	ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1)	O.I.	H.G.	S.X.
0.30	32.7	Os03g0110300	-	-	Conserved hypothetical protein	2e-3	At2g28790	osmotin-like protein, putative	O.I.	H.G.	S.X.
0.30	32.7	Os07g0632800	-	-	Protein kinase domain containing protein	1e-48	At1g14000	VIK (VH1-INTERACTING KINASE)	O.I.	H.G.	S.X.
0.28	31.1	Os03g0808300	-	-	Remorin, C-terminal region domain containingprotein	2e-1	At1g05270	TraB family protein	O.I.	H.G.	S.X.
0.27	27.5	Os04g0556300	-	-	Glutathione peroxidase-like protein GPX54Hv	3e-33	At4g11600	ATGPX6 (GLUTATHIONE PEROXIDASE 6)	O.I.	H.G.	S.X.
0.27	27.5	Os11g0199700	-	-	-	2e-2	At1g21380	VHS domain-containing protein / GAT domain-containing protein	O.I.	H.G.	S.X.
0.27	27.5	Os10g0400100	-	-	Methionyl-tRNA synthetase, class Ia domaincontaining protein	8e-51	At4g13780	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative	O.I.	H.G.	S.X.
0.26	25.6	Os05g0564800	-	-	Conserved hypothetical protein	1e-3	At1g17080	unknown protein	O.I.	H.G.	S.X.
0.25	24.1	Os02g0193800	-	-	ARM repeat fold domain containing protein	6e-1	At2g05117	SCRL9 (SCR-Like 9)	O.I.	H.G.	S.X.
0.25	24.1	Os01g0780500	-	-	SCAMP family protein	1e-14	At2g20840	secretory carrier membrane protein (SCAMP) family protein	O.I.	H.G.	S.X.
0.25	24.1	Os03g0215000	-	-	Conserved hypothetical protein	6e-14	At1g76340	integral membrane family protein	O.I.	H.G.	S.X.
0.24	22.4	Os02g0581300	-	-	ASC1 (Alternaria stem canker resistance protein)	5e-8	At3g25540	LAG1	O.I.	H.G.	S.X.
0.24	22.4	Os04g0517400	-	-	Conserved hypothetical protein	5e-15	At5g18480	PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6)	O.I.	H.G.	S.X.
0.23	21.2	Os01g0936200	-	-	Lipase, class 3 family protein	6e-3	At5g18630	lipase class 3 family protein	O.I.	H.G.	S.X.
0.23	21.2	Os09g0281700	-	-	Ras-related protein RGP1 (GTP-binding regulatoryprotein RGP1)	1e-17	At5g47960	ATRABA4C	O.I.	H.G.	S.X.
0.22	19.4	Os09g0490200	-	-	EIL3	1e-12	At1g73730	EIL3 (ETHYLENE-INSENSITIVE3-LIKE3)	O.I.	H.G.	S.X.
0.20	16.5	Os03g0101100	-	-	Palmitoyl protein thioesterase family protein	6e-1	At5g47330	palmitoyl protein thioesterase family protein	O.I.	H.G.	S.X.
0.20	16.5	Os12g0600400	-	-	Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)(Pyridoxal kinase- like protein SOS4) (Salt overlysensitive 4)	4e-21	At5g37850	SOS4 (SALT OVERLY SENSITIVE 4)	O.I.	H.G.	S.X.
0.19	15.1	Os12g0636800	-	-	Ubiquitin-conjugating enzyme 18 (Fragment)	5e-13	At5g42990	UBC18 (ubiquitin-conjugating enzyme 18)	O.I.	H.G.	S.X.
0.19	15.1	Os03g0638800	-	-	Protein kinase domain containing protein	2e-32	At3g22750	protein kinase, putative	O.I.	H.G.	S.X.
0.19	15.1	Os08g0536000	-	-	Pyruvate dehydrogenase E1 beta subunit isoform 1(EC 1.2.4.1)	9e-44	At5g50850	MAB1 (MACCI-BOU)	O.I.	H.G.	S.X.
0.19	15.1	Os06g0656500	-	-	-	2e-2	At3g21240	4CL2 (4-COUMARATE:COA LIGASE 2)	O.I.	H.G.	S.X.
0.17	12.6	Os05g0102900	-	-	Snf7 family protein	8e-28	At3g10640	VPS60.1	O.I.	H.G.	S.X.
0.15	10.3	Os02g0131200	-	-	Glycosyl transferase, family 3 domain containingprotein	8e-8	At1g70570	anthranilate phosphoribosyltransferase, putative	O.I.	H.G.	S.X.
0.14	9.3	Os06g0622900	-	-	RNA-binding region containing protein 1 (HSRNASEB)(ssDNA binding protein SEB4) (CLL-associated antigenKW-5). Splice isoform 2	4e-3	At1g78260	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.
0.14	9.3	Os11g0587500	-	-	RabGAP/TBC domain containing protein	4e-6	At4g27100	RAB GTPase activator	O.I.	H.G.	S.X.
0.10	5.7	Os03g0224200	-	-	Response regulator receiver domain containingprotein	6e-12	At2g01760	ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14)	O.I.	H.G.	S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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Gene ID	At1g08930
Gene name	ERD6 (EARLY RESPONSE TO DEHYDRATION 6)
Module size	6 genes
NF	0.61
%ile	82.0

Co-expression analysis

Gene ID At1g08930 Gene name ERD6 (EARLY RESPONSE TO DEHYDRATION 6) Module size 6 genes NF 0.61 %ile 82.0

Co-expression network

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein: VF over 0.50, : over 0.25, : below 0.25

Co-expressed genes

Click More genes

Link to AtGenExpress Visualization Tool

Specific experiments for the module

Biological processes inferred to relate to the module

KEGG PATHWAY inferred to related to the module

SFGenesKEGG IDPathway nameLink to KEGG0.074204130SNARE interactions in vesicular transport0.047100380Tryptophan metabolism

Inter-species module comparison

Select a plant to compare co-expressed genes between species.Glycine_maxHordeum_vulgarePopulus_trichocarpaTriticum_aestivumVitis_viniferaZea_mays

Gene ID At1g08930

Gene name ERD6 (EARLY RESPONSE TO DEHYDRATION 6)

Module size 6 genes

NF 0.61

%ile 82.0

: Transcription factor, : Binding protein, : Enzyme protein, : Other protein
: VF over 0.50, : over 0.25, : below 0.25

SF Genes KEGG ID Pathway name Link to KEGG
0.074 2 04130 SNARE interactions in vesicular transport
0.047 1 00380 Tryptophan metabolism

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays