Co-expression analysis

Gene ID AY009939_CDS-2_s_at
Gene name
Homology with ArabidopsisSimilar to At3g43630: nodulin, putative (HF=4e-1)
Module size 7 genes
NF 0.62
%ile 84.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6784.70.87AY009939_CDS-2_s_atAY009939_CDS-2--4e-1At3g43630nodulin, putativeO.I.H.G.S.X.
0.7388.70.87AF427791_CDS-14_atAF427791_CDS-14--1e+0At3g08600unknown proteinO.I.H.G.S.X.
0.7388.70.88Mla1_orf_3pri12_atMla1_orf_3pri12--1e-1At3g43630nodulin, putativeO.I.H.G.S.X.
0.6077.30.91HV03G03u_atHV03G03u--4e+0At5g38790unknown proteinO.I.H.G.S.X.
0.4458.90.91Contig4051_s_atContig4051--2e+0At5g58575-O.I.H.G.S.X.
0.3647.10.90Contig1977_s_atContig1977--5e-7At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.3647.10.91Contig18771_atContig18771--4e+0At1g68200zinc finger (CCCH-type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.3GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
6.798.3GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
4.997.1GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
4.396.4GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
4.296.3GSM261034Dicktoo-chilling-rep2GSE10329Low temperature stress in cv. DicktooLink to GEO
4.196.2GSM261055Bonus Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.096.0GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.895.7GSM261033Dicktoo-chilling-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.695.3GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO
3.595.1GSM261053Bonus Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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