Co-expression analysis

Gene ID	AFFX-r2-Ec-bioD-5_at
Gene name
Homology with Arabidopsis	Similar to : - (HF=)
Module size	10 genes
NF	0.86
%ile	99.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.78	92.6	0.98	AFFX-r2-Ec-bioD-5_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.95	99.6	0.98	AFFX-r2-Ec-bioB-3_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.95	99.6	0.99	AFFX-r2-Ec-bioD-3_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.90	95.6	0.98	AFFX-BioB-3_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.82	93.9	0.98	AFFX-BioB-M_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.82	93.9	0.99	AFFX-BioDn-3_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.78	92.6	0.98	AFFX-r2-Ec-bioB-M_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.78	92.6	0.98	AFFX-CreX-5_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.78	92.6	0.98	AFFX-r2-Ec-bioB-5_at		-	-			-	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	AFFX-r2-P1-cre-5_at		-	-			-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.3	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM436400	V. riparia (VR, PI588259) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436407	V. riparia (VR, PI588259) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436365	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436408	V. riparia (VR, PI588259) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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