Co-expression analysis

Gene ID AFFX-Vvi-actin-5_at
Gene name actin 1
Homology with ArabidopsisSimilar to : - (HF=)
Module size 6 genes
NF 0.78
%ile 97.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.98AFFX-Vvi-actin-5_atactin 1--O.I.H.G.S.X.
0.7390.80.981614946_atCF510992hypothetical protein LOC100258219-8e-64At4g2482026S proteasome regulatory subunit, putative (RPN7)O.I.H.G.S.X.
0.7390.80.991614631_atCB979660hypothetical protein LOC100254376-1e-137At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)O.I.H.G.S.X.
0.6787.90.981617936_atBQ797736similar to 26S proteasome subunit RPN5b-3e-23At5g64760RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)O.I.H.G.S.X.
0.6787.90.991620627_atCF214379hypothetical protein LOC100259195-1e-22At1g20110zinc finger (FYVE type) family proteinO.I.H.G.S.X.
0.4464.10.981614838_atCB977099hypothetical protein LOC100244335-1e-4At1g43640AtTLP5 (TUBBY LIKE PROTEIN 5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.194.6GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.993.8GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.793.0GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.793.0GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.793.0GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.591.9GSM147736Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation65Link to GEO
2.390.7GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.390.7GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.289.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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