Co-expression analysis

Gene ID AFFX-Vvi-actin-3_c7_s_at
Gene name actin 1
Homology with ArabidopsisSimilar to : - (HF=)
Module size 6 genes
NF 0.89
%ile 99.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.99AFFX-Vvi-actin-3_c7_s_atactin 1--O.I.H.G.S.X.
0.8394.60.99AFFX-Vvi-actin-3_c8_s_atactin 1--O.I.H.G.S.X.
0.8394.60.99AFFX-Vvi-actin-3_c2_s_atactin 1--O.I.H.G.S.X.
0.8394.60.99AFFX-Vvi-actin-3_c6_s_atactin 1--O.I.H.G.S.X.
0.7390.80.991606368_s_atCF208516actin 1-0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.7390.80.99AFFX-Vvi-actin-3_s_atactin 1--O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
1.479.9GSM436373Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.377.9GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.377.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.377.9GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.377.9GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.275.6GSM436375Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.275.6GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.275.6GSM436383Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.275.6GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.275.6GSM287884Green soft berry C7 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, , orthologous to the query gene, AFFX-Vvi-actin-3_c7_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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