Co-expression analysis

Gene ID AFFX-Vvi-actin-3_c3_s_at
Gene name actin 1
Homology with ArabidopsisSimilar to : - (HF=)
Module size 9 genes
NF 0.90
%ile 99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8494.80.98AFFX-Vvi-actin-3_c3_s_atactin 1--O.I.H.G.S.X.
0.8995.50.99AFFX-Vvi-actin-3_c7_s_atactin 1--O.I.H.G.S.X.
0.8995.50.99AFFX-Vvi-actin-3_c8_s_atactin 1--O.I.H.G.S.X.
0.8995.50.99AFFX-Vvi-actin-3_c2_s_atactin 1--O.I.H.G.S.X.
0.8895.40.99AFFX-Vvi-actin-3_c6_s_atactin 1--O.I.H.G.S.X.
0.8293.90.99AFFX-Vvi-actin-3_c4_s_atactin 1--O.I.H.G.S.X.
0.8293.90.991606368_s_atCF208516actin 1-0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.8293.90.99AFFX-Vvi-actin-3_s_atactin 1--O.I.H.G.S.X.
0.7892.60.991609191_s_atCB978023hypothetical protein LOC100258056-0At5g26751ATSK11O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.189.1GSM436375Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436416V. riparia (VR, PI588259) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436374Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436373Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436370Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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