Co-expression analysis

Gene ID	AFFX-Tae-r2-Bs-lys-5_at
Gene name
Homology with Arabidopsis	Similar to : - (HF=)
Module size	6 genes
NF	0.58
%ile	83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.93	AFFX-Tae-r2-Bs-lys-5_at	AFFX-Tae-r2-Bs-lys-5	-	-			-	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	Ta.13342.1.S1_at	BQ806974	-	-	1e-9	At5g61960	AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.93	AFFX-Tae-r2-Bs-phe-3_at	AFFX-Tae-r2-Bs-phe-3	-	-			-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.706.1.S1_s_at	AB029454.1	glucose-6-phosphate dehydrogenase	-	2e-29	At3g27300	G6PD5 (glucose-6-phosphate dehydrogenase 5)	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.94	Ta.16490.1.S1_at	CK154344	-	-	6e-55	At5g36880	acetyl-CoA synthetase, putative / acetate-CoA ligase, putative	O.I.	H.G.	S.X.	Please select
0.25	32.1	0.95	TaAffx.4083.1.S1_at	CA599327	-	-	8e-5	At2g14720	VSR-2	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.8	99.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.7	97.9	GSM298088	Crown tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM298084	Crown tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.5	97.8	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM298094	Crown tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM298085	Crown tissue of Solstice at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
4.3	96.7	GSM298083	Crown tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM111185	genotype C22 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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