Co-expression analysis

Gene ID AFFX-Tae-r2-Bs-lys-5_at
Gene name
Homology with ArabidopsisSimilar to : - (HF=)
Module size 6 genes
NF 0.58
%ile 83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.93AFFX-Tae-r2-Bs-lys-5_atAFFX-Tae-r2-Bs-lys-5---O.I.H.G.S.X.
0.7790.80.93Ta.13342.1.S1_atBQ806974--1e-9At5g61960AML1 (ARABIDOPSIS MEI2-LIKE PROTEIN 1)O.I.H.G.S.X.
0.5576.80.93AFFX-Tae-r2-Bs-phe-3_atAFFX-Tae-r2-Bs-phe-3---O.I.H.G.S.X.
0.4464.50.97Ta.706.1.S1_s_atAB029454.1glucose-6-phosphate dehydrogenase-2e-29At3g27300G6PD5 (glucose-6-phosphate dehydrogenase 5)O.I.H.G.S.X.
0.3346.90.94Ta.16490.1.S1_atCK154344--6e-55At5g36880acetyl-CoA synthetase, putative / acetate-CoA ligase, putativeO.I.H.G.S.X.
0.2532.10.95TaAffx.4083.1.S1_atCA599327--8e-5At2g14720VSR-2O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.899.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.797.9GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM298084Crown tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.597.8GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM298085Crown tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.396.7GSM298083Crown tissue of Solstice at 3 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM111185genotype C22 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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