Co-expression analysis

Gene ID AF474072_CDS-4_at
Gene name
Homology with ArabidopsisSimilar to At5g05810: ATL43 (HF=1e+0)
Module size 7 genes
NF 0.64
%ile 86.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.96AF474072_CDS-4_atAF474072_CDS-4--1e+0At5g05810ATL43O.I.H.G.S.X.
0.7388.70.97EBro08_SQ001_H04_atEBro08_SQ001_H04--1e+1At5g23027unknown proteinO.I.H.G.S.X.
0.6784.70.97V00087.1_atV00087.1--3e-1At5g43525-O.I.H.G.S.X.
0.6178.70.97EBro02_SQ008_P15_atEBro02_SQ008_P15--1e+1At5g43211unknown proteinO.I.H.G.S.X.
0.6077.30.97Contig14886_atContig14886--1e+0At3g07860unknown proteinO.I.H.G.S.X.
0.5975.80.97HVSMEg0002G01r2_x_atHVSMEg0002G01r2--6e+0At5g39360EDL2 (EID1-like 2)O.I.H.G.S.X.
0.5674.30.97HA31G21r_atHA31G21r--2e+0At5g17190unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.999.1GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.598.8GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
8.598.8GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
7.498.5GSM440978Stressed seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.697.7GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
5.697.7GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.497.5GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.997.1GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.796.9GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.596.7GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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