Co-expression analysis

Gene ID AF032681_at
Gene name
Homology with ArabidopsisSimilar to At1g75717: unknown protein (HF=6e-1)
Module size 41 genes
NF 0.14
%ile 16.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.87AF032681_atAF032681--6e-1At1g75717unknown proteinO.I.H.G.S.X.
0.3240.30.93Contig20782_atContig20782--4e-5At4g23230protein kinase family proteinO.I.H.G.S.X.
0.2835.50.92Contig4515_atContig4515--4e-3At1g53210sodium/calcium exchanger family protein / calcium-binding EF hand family proteinO.I.H.G.S.X.
0.2835.50.93Contig11385_atContig11385--3e+0At5g47290myb family transcription factorO.I.H.G.S.X.
0.2835.50.93HS06F14u_s_atHS06F14u--3e-1At1g54630ACP3 (ACYL CARRIER PROTEIN 3)O.I.H.G.S.X.
0.2630.40.94Contig17645_atContig17645--2e+0At3g56810unknown proteinO.I.H.G.S.X.
0.2427.20.94Contig18688_atContig18688--5e+0At5g09260VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)O.I.H.G.S.X.
0.2427.20.93HV_CEb0012P03f_atHV_CEb0012P03f--3e+0At5g17390universal stress protein (USP) family proteinO.I.H.G.S.X.
0.2326.10.92Contig16137_atContig16137--1e+0At1g32440PKp3 (plastidial pyruvate kinase 3)O.I.H.G.S.X.
0.2326.10.93Contig19631_atContig19631--4e-1At2g04880ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1)O.I.H.G.S.X.
0.2224.20.90EBro03_SQ005_O21_x_atEBro03_SQ005_O21--4e+0At5g1838040S ribosomal protein S16 (RPS16C)O.I.H.G.S.X.
0.2224.20.93Contig23998_atContig23998--4e+0At3g21150zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.2224.20.94Contig13852_atContig13852--2e+0At5g16470zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2021.10.94Contig7975_atContig7975--1e-1At4g35600CONNEXIN 32O.I.H.G.S.X.
0.2021.10.94Contig15963_atContig15963--3e+0At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)O.I.H.G.S.X.
0.1919.60.93rbaal25b04_atrbaal25b04--2e-1At3g58230unknown proteinO.I.H.G.S.X.
0.1615.30.94Contig3797_atContig3797--4e-1At5g59720HSP18.2 (heat shock protein 18.2)O.I.H.G.S.X.
0.1615.30.94Contig10942_atContig10942--3e+0At5g39330unknown proteinO.I.H.G.S.X.
0.1615.30.92Contig23547_atContig23547--1e-7At5g54140ILL3O.I.H.G.S.X.
0.1514.10.93HY10O14u_x_atHY10O14u--6e-2At2g47270transcription factor/ transcription regulatorO.I.H.G.S.X.
0.1412.90.94rbags21n02_atrbags21n02--3e-1At2g46680ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7)O.I.H.G.S.X.
0.1412.90.93Contig17096_atContig17096--7e-2At5g24430calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.1412.90.93Contig9745_atContig9745--3e+0At5g53330-O.I.H.G.S.X.
0.1311.60.93Contig13187_atContig13187--1e-2At1g67320DNA primase, large subunit familyO.I.H.G.S.X.
0.1210.40.93HVSMEa0002K17r2_atHVSMEa0002K17r2--5e+0At5g16040regulator of chromosome condensation (RCC1) family proteinO.I.H.G.S.X.
0.1210.40.94Contig1478_s_atContig1478--2e+0At3g17300-O.I.H.G.S.X.
0.119.40.92Contig3165_atContig3165--2e-28At1g28550AtRABA1i (Arabidopsis Rab GTPase homolog A1i)O.I.H.G.S.X.
0.119.40.92Contig15539_atContig15539--2e+0At2g24490RPA2 (REPLICON PROTEIN A2)O.I.H.G.S.X.
0.119.40.93Contig20746_atContig20746--4e-19At4g33460ATNAP13O.I.H.G.S.X.
0.108.40.93Contig20654_atContig20654--6e+0At4g37230oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putativeO.I.H.G.S.X.
0.108.40.93HW05P14u_atHW05P14u--2e-1At1g64830aspartyl protease family proteinO.I.H.G.S.X.
0.108.40.94Contig23792_atContig23792--3e-1At1g31060unknown proteinO.I.H.G.S.X.
0.086.50.93Contig12648_atContig12648--6e-3At5g38160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.086.50.95Contig12656_s_atContig12656--8e+0At5g45830DOG1 (DELAY OF GERMINATION 1)O.I.H.G.S.X.
0.086.50.91Contig13277_atContig13277--6e+0At5g42680unknown proteinO.I.H.G.S.X.
0.075.80.95Contig6058_atContig6058--8e-1At2g22250aminotransferase class I and II family proteinO.I.H.G.S.X.
0.075.80.93HT05P07u_s_atHT05P07u--3e+0At1g32585VQ motif-containing protein-relatedO.I.H.G.S.X.
0.064.80.91HO09J15S_atHO09J15S--9e+0At5g40630ubiquitin family proteinO.I.H.G.S.X.
0.064.80.93Contig16782_atContig16782--1e+0At1g27000bZIP family transcription factorO.I.H.G.S.X.
0.064.80.94Contig20154_atContig20154--2e-2At1g16440kinaseO.I.H.G.S.X.
0.064.80.94Contig25893_atContig25893--5e+0At2g03937-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.7GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.596.7GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
3.895.7GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
3.795.5GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.194.1GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.194.1GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
2.893.1GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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