Co-expression analysis

Gene ID 1622881_x_at
Gene name
Homology with ArabidopsisSimilar to At2g39770: CYT1 (CYTOKINESIS DEFECTIVE 1) (HF=7e-5)
Module size 27 genes
NF 0.24
%ile 34.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8093.60.931622881_x_atCK136938.1--7e-5At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)O.I.H.G.S.X.
0.3954.90.961616416_atCB349840hypothetical protein LOC100251243-7e+0At3g43740leucine-rich repeat family proteinO.I.H.G.S.X.
0.3751.70.971612900_atCD797784hypothetical protein LOC100259949-5e+0At5g44585unknown proteinO.I.H.G.S.X.
0.3751.70.961620387_atCD719602hypothetical protein LOC100260954-2e-30At5g07290AML4 (ARABIDOPSIS MEI2-LIKE 4)O.I.H.G.S.X.
0.3751.70.951611427_x_atCF202711.1--7e+0At5g64810WRKY51O.I.H.G.S.X.
0.3243.10.961611218_atCB912267hypothetical LOC100261590-3e-1At1g66360C2 domain-containing proteinO.I.H.G.S.X.
0.3243.10.961613790_atBQ799915hypothetical protein LOC100258406-4e-88At5g47780GAUT4 (Galacturonosyltransferase 4)O.I.H.G.S.X.
0.3141.30.961612087_atCB339591--2e+0At2g28140unknown proteinO.I.H.G.S.X.
0.2837.70.951607490_atCF214086hypothetical protein LOC100258031-1e-5At1g08340rac GTPase activating protein, putativeO.I.H.G.S.X.
0.2632.00.951612421_atCF213299hypothetical protein LOC100262002-4e+0At5g13080WRKY75O.I.H.G.S.X.
0.2327.50.951618109_atCB971579--2e-11At3g54170ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37)O.I.H.G.S.X.
0.2225.60.961606496_atCB979201--1e+0At3g47410unknown proteinO.I.H.G.S.X.
0.2225.60.951621260_atBQ797265--3e-1At4g30630unknown proteinO.I.H.G.S.X.
0.2124.00.971618609_s_atBQ800563hypothetical protein LOC100249094-1e+0At4g28556RIC7O.I.H.G.S.X.
0.1920.90.951622240_x_atCF202008.1--7e+0At5g37580-O.I.H.G.S.X.
0.1718.20.961616661_atCF209343--7e-9At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.1718.20.971611871_atCF415063dehydroascorbate reductase-2e-9At1g19570DHAR1 (dehydroascorbate reductase)O.I.H.G.S.X.
0.1718.20.971606787_atCF373239hypothetical protein LOC100258674-4e-1At1g13620unknown proteinO.I.H.G.S.X.
0.1616.70.961612097_atCB348571--6e-5At4g23400PIP1O.I.H.G.S.X.
0.1616.70.951612983_atCB344129hypothetical protein LOC100249094-1e-1At3g15790MBD11O.I.H.G.S.X.
0.1616.70.961616682_atCF512457hypothetical protein LOC100266059-9e-37At4g18030dehydration-responsive family proteinO.I.H.G.S.X.
0.1616.70.971619095_s_atCB341757hypothetical protein LOC100257742-8e-8At5g63280zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.1515.60.971616756_atCB347149--3e-16At3g66658ALDH22a1 (Aldehyde Dehydrogenase 22a1)O.I.H.G.S.X.
0.1515.60.961617258_atCF516015hypothetical protein LOC100245053-4e+0At5g23060CaS (Calcium sensing receptor)O.I.H.G.S.X.
0.1515.60.971620282_atCB977969hypothetical protein LOC100243325-5e+0At5g13440ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeO.I.H.G.S.X.
0.1414.40.961616802_s_atCF200896.1--2e+0At2g43060transcription factorO.I.H.G.S.X.
0.1212.10.961616367_x_atCF201916.1--4e-10At5g13030unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.289.9GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.088.2GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.886.0GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage