Co-expression analysis

Gene ID 1622840_at
Gene name hypothetical protein LOC100251026
Homology with ArabidopsisSimilar to At1g60780: HAP13 (HAPLESS 13) (HF=3e-39)
Module size 9 genes
NF 0.35
%ile 50.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8494.80.961622840_atCF213749hypothetical protein LOC100251026-3e-39At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.6384.30.971612324_s_atCF514894hypothetical protein LOC100261737-4e-122At2g3161040S ribosomal protein S3 (RPS3A)O.I.H.G.S.X.
0.6183.20.971611402_atCB340250hypothetical protein LOC100243581-2e-21At5g4643060S ribosomal protein L32 (RPL32B)O.I.H.G.S.X.
0.3650.70.981620354_atCF372581hypothetical protein LOC100261409-1e-15At5g2777060S ribosomal protein L22 (RPL22C)O.I.H.G.S.X.
0.3243.10.981613599_a_atBQ799080hypothetical protein LOC100253770 /// hypothetical protein LOC100263573-5e-56At4g1672060S ribosomal protein L15 (RPL15A)O.I.H.G.S.X.
0.2937.70.981611700_atCF215728hypothetical protein LOC100254168-2e-9At3g59650mitochondrial ribosomal protein L51/S25/CI-B8 family proteinO.I.H.G.S.X.
0.2124.00.971621039_s_atCB973058hypothetical protein LOC100251294-5e-57At4g31700RPS6 (RIBOSOMAL PROTEIN S6)O.I.H.G.S.X.
0.1819.40.971607966_atCD798713hypothetical protein LOC100251385-8e+0At5g05840unknown proteinO.I.H.G.S.X.
0.1718.20.971608210_atCF212773hypothetical protein LOC100259736-1e-44At1g70600structural constituent of ribosomeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.597.5GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM436399V. riparia (VR, PI588259) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
1.987.2GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
1.987.2GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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