Co-expression analysis

Gene ID 1622819_at
Gene name hypothetical protein LOC100264319
Homology with ArabidopsisSimilar to At4g00110: GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3) (HF=5e-18)
Module size 11 genes
NF 0.46
%ile 68.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4767.70.961622819_atBQ798887hypothetical protein LOC100264319-5e-18At4g00110GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3)O.I.H.G.S.X.
0.6988.30.971609143_atCF209852hypothetical protein LOC100254311-2e+1At5g66240transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.6183.20.971618990_atCF513182hypothetical protein LOC100243216-2e-1At5g62880ARAC10O.I.H.G.S.X.
0.5980.60.981609772_atCF511919hypothetical protein LOC100246247-3e-1At3g56880VQ motif-containing proteinO.I.H.G.S.X.
0.5779.80.981612852_atCB976927hypothetical protein LOC100243284-5e-76At5g62890permease, putativeO.I.H.G.S.X.
0.5072.70.981608070_atCF214791hypothetical protein LOC100245501-1e+0At4g10880unknown proteinO.I.H.G.S.X.
0.4666.50.971613050_atCB971087hypothetical protein LOC100248215-5e-4At1g20470auxin-responsive family proteinO.I.H.G.S.X.
0.4158.70.981606807_atBQ794559hypothetical protein LOC100264697-7e-21At5g11710epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.3650.70.981615115_atCD801173hypothetical protein LOC100244778-1e-38At5g05080UBC22 (ubiquitin-conjugating enzyme 22)O.I.H.G.S.X.
0.3345.70.971609398_atCF413640hypothetical protein LOC100261736-3e-66At5g23860TUB8O.I.H.G.S.X.
0.2428.70.971611691_s_atCB980403hypothetical protein LOC100265089-6e-59At5g36290unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.898.6GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.395.2GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.491.3GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
2.189.1GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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