Co-expression analysis

Gene ID	1622817_at
Gene name	hypothetical protein LOC100251895
Homology with Arabidopsis	Similar to At2g40660: tRNA-binding region domain-containing protein (HF=4e-42)
Module size	6 genes
NF	0.46
%ile	68.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.99	1622817_at	CD012829	hypothetical protein LOC100251895	-	4e-42	At2g40660	tRNA-binding region domain-containing protein	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.98	1614845_at	CF405772	hypothetical protein LOC100262902	-	1e+0	At1g65900	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1621111_at	BQ798687	hypothetical protein LOC100254821	-	2e+0	At4g33145	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1613765_at	BQ798079	hypothetical protein LOC100262312	-	1e-3	At3g48750	CDC2 (CELL DIVISION CONTROL 2)	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.98	1618562_at	CF512114	hypothetical protein LOC100258848	-	8e-3	At4g02450	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.99	1608425_at	CB910322	hypothetical protein LOC100267018	-	1e-1	At5g67510	60S ribosomal protein L26 (RPL26B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	99.1	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.1	98.1	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.9	97.9	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.6	97.6	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.0	96.7	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.8	93.4	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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