Co-expression analysis

Gene ID 1622811_at
Gene name hypothetical protein LOC100240884
Homology with ArabidopsisSimilar to At1g64900: CYP89A2 (CYTOCHROME P450 89A2) (HF=3e-11)
Module size 29 genes
NF 0.43
%ile 64.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.931622811_atCB006666hypothetical protein LOC100240884-3e-11At1g64900CYP89A2 (CYTOCHROME P450 89A2)O.I.H.G.S.X.
0.6988.30.971608777_atCB344861hypothetical protein LOC100266496-6e-19At3g63410APG1 (ALBINO OR PALE GREEN MUTANT 1)O.I.H.G.S.X.
0.5980.60.961610664_s_atCF213279hypothetical protein LOC100259928-5e+0At5g18661unknown proteinO.I.H.G.S.X.
0.5879.80.961617391_atCF211113hypothetical protein LOC100254621-1e-55At1g04620coenzyme F420 hydrogenase family / dehydrogenase, beta subunit familyO.I.H.G.S.X.
0.5779.80.961615234_atCB342968hypothetical protein LOC100258729-3e-17At1g54350ABC transporter family proteinO.I.H.G.S.X.
0.5679.40.961611394_atBQ794749hypothetical protein LOC100241599-7e-5At5g62840phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.5679.40.961618847_s_atCF207150hypothetical protein LOC100244868-7e-47At3g63490ribosomal protein L1 family proteinO.I.H.G.S.X.
0.5679.40.961615791_s_atCA809329hypothetical protein LOC100260183-2e-37At2g45990unknown proteinO.I.H.G.S.X.
0.5577.30.961621979_atCB339366hypothetical protein LOC100254010-7e-12At1g62850-O.I.H.G.S.X.
0.5173.20.971607125_atCB342111hypothetical protein LOC100242557-8e-2At5g26820ATIREG3 (IRON-REGULATED PROTEIN 3)O.I.H.G.S.X.
0.4868.80.971620190_atCA817971hypothetical protein LOC100267159-1e-16At5g13720-O.I.H.G.S.X.
0.4868.80.971611605_s_atCF371905hypothetical protein LOC100257686-2e-3At2g31050plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.4666.50.951609155_atCA817603hypothetical protein LOC100256254-2e-31At3g10130SOUL heme-binding family proteinO.I.H.G.S.X.
0.4666.50.971619317_atCF516706hypothetical protein LOC100250509-4e-125At5g42270VAR1 (VARIEGATED 1)O.I.H.G.S.X.
0.4666.50.971611274_atCF208296hypothetical protein LOC100247974-3e-71At5g58330malate dehydrogenase (NADP), chloroplast, putativeO.I.H.G.S.X.
0.4464.10.961616613_atCD009052hypothetical protein LOC100259706-6e-1At4g02920unknown proteinO.I.H.G.S.X.
0.4361.50.951607964_s_atBM437259hypothetical protein LOC100257686-4e-1At5g08410FTRA2 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 2)O.I.H.G.S.X.
0.4260.10.951615369_atCB918327hypothetical protein LOC100244035-1e+0At1g01800short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.4057.70.961610033_s_atCA816852hypothetical protein LOC100246804-4e-28At5g19855unknown proteinO.I.H.G.S.X.
0.3954.90.971611423_s_atCB916855hypothetical protein LOC100254781-4e+0At4g01430nodulin MtN21 family proteinO.I.H.G.S.X.
0.3853.60.961617645_s_atCA818763hypothetical protein LOC100257292-2e-96At5g46110APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)O.I.H.G.S.X.
0.3853.60.961616949_atCF519047hypothetical protein LOC100250114-2e-34At5g53170FTSH11 (FtsH protease 11)O.I.H.G.S.X.
0.3650.70.961616588_atBQ792380hypothetical protein LOC100268155-2e-20At2g25870haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.3446.80.971607313_s_atCB340858glutamine synthetase-2e-9At5g16570GLN1O.I.H.G.S.X.
0.3446.80.971620973_s_atBQ798594hypothetical protein LOC100265749-4e+0At3g22415unknown proteinO.I.H.G.S.X.
0.3345.70.961608590_atCB004413hypothetical protein LOC100241208-2e-5At5g64300ATGCHO.I.H.G.S.X.
0.3345.70.971621271_atCA817593hypothetical protein LOC100244294-2e+0At5g28931unknown proteinO.I.H.G.S.X.
0.1920.90.961619362_atCA817556hypothetical protein LOC100267110-4e+0At5g06650GIS2 (GLABROUS INFLORESCENCE STEMS 2)O.I.H.G.S.X.
0.1515.60.961614231_s_atCB970079hypothetical protein LOC100245250-3e-5At3g15360TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.491.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.886.0GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
1.886.0GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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