Co-expression analysis

Gene ID 1622789_x_at
Gene name
Homology with ArabidopsisSimilar to At5g53590: auxin-responsive family protein (HF=4e+1)
Module size 18 genes
NF 0.36
%ile 53.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8193.70.981622789_x_atCF206467.1--4e+1At5g53590auxin-responsive family proteinO.I.H.G.S.X.
0.6384.30.981618996_atCD801234hypothetical protein LOC100241601-8e-17At5g41560-O.I.H.G.S.X.
0.5475.70.981609452_atBQ794280hypothetical protein LOC100249768-3e-1At4g31460ribosomal protein L28 family proteinO.I.H.G.S.X.
0.4666.50.981619154_atCF212140hypothetical protein LOC100246237-1e-7At4g25770unknown proteinO.I.H.G.S.X.
0.4564.60.981619013_atCF514808hypothetical protein LOC100242671-3e-32At1g03260-O.I.H.G.S.X.
0.4361.50.981606735_atCB970224hypothetical protein LOC100249353-4e+0At3g15420unknown proteinO.I.H.G.S.X.
0.3548.50.981608302_atBQ792683hypothetical protein LOC100253708-4e-3At4g26750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3345.70.981620980_s_atCF209157hypothetical protein LOC100255909-7e-6At1g14685BPC2 (BASIC PENTACYSTEINE 2)O.I.H.G.S.X.
0.3243.10.991611870_atCF414975hypothetical protein LOC100247177-8e-152At5g09740HAM2 (histone acetyltransferase of the MYST family 2)O.I.H.G.S.X.
0.3141.30.991618348_atCF373264hypothetical protein LOC100265921-1e-47At5g45750AtRABA1c (Arabidopsis Rab GTPase homolog A1c)O.I.H.G.S.X.
0.3141.30.991615804_atCF403733--4e-2At5g65910BSD domain-containing proteinO.I.H.G.S.X.
0.2937.70.981622077_s_atCF372353hypothetical protein LOC100249199-3e-21At3g27430PBB1O.I.H.G.S.X.
0.2937.70.981621155_atBQ794745hypothetical protein LOC100248478-8e-34At2g30260U2B'' (U2 small nuclear ribonucleoprotein B)O.I.H.G.S.X.
0.2530.50.98AFFX-Vvi-actin-3_c7_s_atactin 1--O.I.H.G.S.X.
0.2428.70.981617244_s_atCB341989hypothetical protein LOC100262315-1e-23At4g22150PUX3O.I.H.G.S.X.
0.2327.50.981613731_atCF513972hypothetical protein LOC100248748-2e-5At5g63840RSW3 (RADIAL SWELLING 3)O.I.H.G.S.X.
0.2022.40.98AFFX-Vvi-actin-3_c8_s_atactin 1--O.I.H.G.S.X.
0.2022.40.991613769_atCB970019hypothetical protein LOC100265267-4e-48At1g51690ATB ALPHAO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.591.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.189.1GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.987.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.886.0GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.886.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.784.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.784.7GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
1.784.7GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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