Co-expression analysis

Gene ID 1622773_at
Gene name hypothetical protein LOC100253381
Homology with ArabidopsisSimilar to At4g15975: protein binding / zinc ion binding (HF=2e-2)
Module size 9 genes
NF 0.71
%ile 94.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.931622773_atCF605812hypothetical protein LOC100253381-2e-2At4g15975protein binding / zinc ion bindingO.I.H.G.S.X.
0.8093.60.951609190_atBQ798327hypothetical protein LOC100253381-6e+0At3g23180-O.I.H.G.S.X.
0.8093.60.951612490_atCB035871--4e+0At2g39920acid phosphatase class B family proteinO.I.H.G.S.X.
0.8093.60.961622598_atCF372747hypothetical protein LOC100253485-3e-27At5g22250CCR4-NOT transcription complex protein, putativeO.I.H.G.S.X.
0.7189.50.951609990_atCB009298similar to putative ethylene response factor ERF3b-1e-13At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.H.G.S.X.
0.6787.90.951608256_atCF404926hypothetical protein LOC100265659-3e-2At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.6384.30.951616198_atCF405950hypothetical protein LOC100242144-1e-7At1g28370ERF11 (ERF DOMAIN PROTEIN 11)O.I.H.G.S.X.
0.6384.30.961608966_atCB982651hypothetical protein LOC100256404-2e-4At5g59550zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5375.20.951606975_atCD799008hypothetical protein LOC100248784-4e-5At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.595.7GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.793.0GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.591.9GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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