Co-expression analysis

Gene ID 1622762_x_at
Gene name hypothetical protein LOC100246482
Homology with ArabidopsisSimilar to At1g22360: AtUGT85A2 (UDP-glucosyl transferase 85A2) (HF=7e-5)
Module size 6 genes
NF 0.23
%ile 32.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.90.901622762_x_atCD801850hypothetical protein LOC100246482-7e-5At1g22360AtUGT85A2 (UDP-glucosyl transferase 85A2)O.I.H.G.S.X.
0.7390.80.911611452_atCD801850hypothetical protein LOC100246482-7e-5At1g22360AtUGT85A2 (UDP-glucosyl transferase 85A2)O.I.H.G.S.X.
0.5072.70.941617151_s_atCF372658hypothetical protein LOC100259317-2e-11At1g80120unknown proteinO.I.H.G.S.X.
0.2937.70.901610527_atCA815926hypothetical protein LOC100260552-4e-3At3g18830ATPLT5 (POLYOL TRANSPORTER 5)O.I.H.G.S.X.
0.1313.30.901621439_s_atCB343781hypothetical protein LOC100262404-6e-3At1g71520AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.1010.30.901618741_atCF208732hypothetical protein LOC100257595-1e-10At1g06040STO (SALT TOLERANCE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.088.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.088.2GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.987.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.987.2GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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