Co-expression analysis

Gene ID 1622756_at
Gene name similar to 60S ribosomal protein L34
Homology with ArabidopsisSimilar to At1g69620: RPL34 (RIBOSOMAL PROTEIN L34) (HF=5e-31)
Module size 8 genes
NF 0.58
%ile 85.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.90.981622756_atCF414976similar to 60S ribosomal protein L34-5e-31At1g69620RPL34 (RIBOSOMAL PROTEIN L34)O.I.H.G.S.X.
0.6787.90.991610497_s_atBQ794436hypothetical protein LOC100243420-1e-50At3g0492040S ribosomal protein S24 (RPS24A)O.I.H.G.S.X.
0.6183.20.991606742_atCF405288similar to 40S ribosomal S4 protein-2e-86At5g5842040S ribosomal protein S4 (RPS4D)O.I.H.G.S.X.
0.6183.20.991618864_atBQ800592similar to ribosomal protein L10a-5e-56At1g0836060S ribosomal protein L10A (RPL10aA)O.I.H.G.S.X.
0.5577.30.991609627_s_atCB978960hypothetical protein LOC100256302-9e-3At5g0951040S ribosomal protein S15 (RPS15D)O.I.H.G.S.X.
0.5577.30.991607259_s_atCF511061hypothetical protein LOC100242794-7e-65At2g4412060S ribosomal protein L7 (RPL7C)O.I.H.G.S.X.
0.5072.70.991608425_atCB910322hypothetical protein LOC100267018-1e-1At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.
0.3954.90.991615194_atCF373310hypothetical protein LOC100256025-3e-29At1g7794060S ribosomal protein L30 (RPL30B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.096.7GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436386Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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