Co-expression analysis

Gene ID 1622746_at
Gene name
Homology with ArabidopsisSimilar to Atcg00810: - (HF=1e+1)
Module size 31 genes
NF 0.32
%ile 46.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9095.60.871622746_atCA814164--1e+1Atcg00810-O.I.H.G.S.X.
0.5679.40.921606579_atCD717396--1e+0At3g23770glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.4767.70.951622124_atCF514734--2e+0At2g22570NIC1 (NICOTINAMIDASE 1)O.I.H.G.S.X.
0.4666.50.951617509_atCB974166--2e+0At5g07475plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.4260.10.941606916_atCF202248.1--1e-1At3g10640VPS60.1O.I.H.G.S.X.
0.4057.70.941615721_atCA818745--4e+0At3g23620brix domain-containing proteinO.I.H.G.S.X.
0.4057.70.951618360_atCF204032.1--5e-13At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.3853.60.941614246_atCF202512.1--3e-4At1g23480ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)O.I.H.G.S.X.
0.3751.70.951619863_atCF203721.1--2e+0At1g19930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3751.70.921609440_atCA813618--4e+0At3g57310protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3751.70.941610687_atCF511229--1e-35At2g37680-O.I.H.G.S.X.
0.3650.70.901617437_atCF517117--4e+0At5g65780ATBCAT-5O.I.H.G.S.X.
0.3650.70.921614691_atCF517438--1e+0At3g54360protein binding / zinc ion bindingO.I.H.G.S.X.
0.3446.80.941613218_atCF202458.1--3e+0At1g80520-O.I.H.G.S.X.
0.3345.70.951606737_atBQ795334--3e+0At2g45860unknown proteinO.I.H.G.S.X.
0.3345.70.911617312_atBQ800595--7e-2At4g15970unknown proteinO.I.H.G.S.X.
0.3243.10.931621173_s_atCF514876hypothetical protein LOC100245878-1e+0At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)O.I.H.G.S.X.
0.3141.30.951610035_x_atCF202356.1hypothetical protein LOC100248145-4e-22At1g04410malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.3141.30.941616093_atCF404665similar to pectin methylesterase 1-6e-2At4g33220enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.3141.30.921617497_atCF202356.1hypothetical protein LOC100248145-4e-22At1g04410malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.3039.40.941611243_atCF206227.1--3e-14At5g24650mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.2837.70.951607190_atCB981263--1e+0At2g35480unknown proteinO.I.H.G.S.X.
0.2734.00.941619350_atCB838046--5e+0At5g06430thioredoxin-relatedO.I.H.G.S.X.
0.2632.00.951619805_atCB976900similar to leucine-rich repeat protein-related-4e-9At1g25570leucine-rich repeat protein-relatedO.I.H.G.S.X.
0.2428.70.931612391_atCF517423hypothetical protein LOC100266034-2e-1At4g14815protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2327.50.921618610_atCD010864--9e-2At3g28223-O.I.H.G.S.X.
0.2225.60.931612286_atCB981439--4e+0At3g55252-O.I.H.G.S.X.
0.2022.40.931609037_atCB342383--4e-3At5g08350GRAM domain-containing protein / ABA-responsive protein-relatedO.I.H.G.S.X.
0.1920.90.931621847_atCF202726.1hypothetical protein LOC100267426-4e+0At4g17310unknown proteinO.I.H.G.S.X.
0.1515.60.951607162_s_atCF512517--3e+0At2g30570PSBW (PHOTOSYSTEM II REACTION CENTER W)O.I.H.G.S.X.
0.1414.40.931609085_atCF207769--9e-1At5g02790In2-1 protein, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.088.2GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
1.987.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.987.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.987.2GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
1.987.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
1.987.2GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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