Co-expression analysis

Gene ID 1622726_at
Gene name
Homology with ArabidopsisSimilar to At2g45200: GOS12 (GOLGI SNARE 12) (HF=4e+0)
Module size 6 genes
NF 0.32
%ile 46.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.30.981622726_atCF515466--4e+0At2g45200GOS12 (GOLGI SNARE 12)O.I.H.G.S.X.
0.6787.90.981607130_atBQ797379--3e-1At5g67270ATEB1C (microtubule end binding protein 1)O.I.H.G.S.X.
0.4666.50.971616899_atCF214393hypothetical protein LOC100247536-8e-23At5g20510AL5 (ALFIN-LIKE 5)O.I.H.G.S.X.
0.4057.70.981610681_atCB917493hypothetical protein LOC100258707-9e-1At3g15870oxidoreductaseO.I.H.G.S.X.
0.1920.90.981608993_atCF213908hypothetical protein LOC100244723-1e+0At1g60920agl55 (AGAMOUS-LIKE 55)O.I.H.G.S.X.
0.1212.10.981611258_atCD719985hypothetical protein LOC100265514-4e+0At1g25988-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.297.1GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.996.6GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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