Co-expression analysis

Gene ID	1622650_at
Gene name
Homology with Arabidopsis	Similar to At1g15290: binding (HF=1e-71)
Module size	6 genes
NF	0.02
%ile	4.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.85	1622650_at	CD714725	-	-	1e-71	At1g15290	binding	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.95	1619166_at	CF515677	hypothetical protein LOC100263264	-	3e-13	At4g11860	-	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.93	1610127_at	CB920325	-	-	1e-1	At3g15355	UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.93	1611828_s_at	CB342309	hypothetical protein LOC100243384	-	1e-3	At2g24060	translation initiation factor 3 (IF-3) family protein	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.92	1616379_s_at	CF510946	hypothetical protein LOC100246496	-	1e-2	At4g00560	methionine adenosyltransferase regulatory beta subunit-related	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.92	1607370_at	CF513264	hypothetical protein LOC100264871	-	8e-124	At3g52140	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.2	89.9	GSM436387	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.0	88.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.0	88.2	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436352	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.9	87.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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