Co-expression analysis

Gene ID 1622623_at
Gene name hypothetical protein LOC100258799
Homology with ArabidopsisSimilar to At1g64680: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.24
%ile 34.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.871622623_atCF514619hypothetical protein LOC100258799-1e+0At1g64680unknown proteinO.I.H.G.S.X.
0.4057.70.901619359_atCF404659hypothetical protein LOC100258799-3e-1At5g24910CYP714A1O.I.H.G.S.X.
0.3853.60.881608099_atCD800698brassinosteroid-6-oxidase-5e-6At3g30180BR6OX2 (BRASSINOSTEROID-6-OXIDASE 2)O.I.H.G.S.X.
0.3345.70.861616880_atCF209215hypothetical protein LOC100258571-3e-1At4g37980ELI3-1 (ELICITOR-ACTIVATED GENE 3-1)O.I.H.G.S.X.
0.1212.10.871613831_atCD801016hypothetical protein LOC100247537-1e-10At4g37970CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6)O.I.H.G.S.X.
0.1111.30.871611613_atBQ796771hypothetical protein LOC100256970-3e+0At4g15630integral membrane family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
2.692.5GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.692.5GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.591.9GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.491.3GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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