Co-expression analysis

Gene ID	1622607_at
Gene name	hypothetical protein LOC100250080
Homology with Arabidopsis	Similar to At2g36830: GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN) (HF=1e-8)
Module size	6 genes
NF	0.79
%ile	97.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.88	1622607_at	AF271662.1	hypothetical protein LOC100250080	-	1e-8	At2g36830	GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.86	1609790_at	CF207994	hypothetical protein LOC100252173	-	1e-10	At3g23730	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.90	1614387_s_at	AF271662.1	hypothetical protein LOC100250080	-	1e-8	At2g36830	GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)	O.I.	H.G.	S.X.	Please select
0.77	92.3	0.86	1612509_at	BQ792148	polygalacturonase	-	5e-6	At5g14650	polygalacturonase, putative / pectinase, putative	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.85	1613376_at	AF159125.1	polygalacturonase	-	8e-9	At5g14650	polygalacturonase, putative / pectinase, putative	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.89	1621879_at	CF215292	hypothetical protein LOC100244617	-	5e+0	At5g45350	proline-rich family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	96.9	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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