Co-expression analysis

Gene ID 1622559_at
Gene name hypothetical LOC100244512
Homology with ArabidopsisSimilar to At1g42990: ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60) (HF=9e-22)
Module size 6 genes
NF 0.24
%ile 33.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.981622559_atCF606481hypothetical LOC100244512-9e-22At1g42990ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60)O.I.H.G.S.X.
0.3345.70.981620076_s_atCA809762hypothetical protein LOC100254960-6e-15At1g15270-O.I.H.G.S.X.
0.2124.00.981615700_atCA809560similar to VPS24.1-2e-8At5g22950VPS24.1O.I.H.G.S.X.
0.1920.90.981610645_atCD004549hypothetical protein LOC100251896-2e-13At1g61620phosphoinositide bindingO.I.H.G.S.X.
0.1616.70.981612888_atCF406033--4e+0At4g16080unknown proteinO.I.H.G.S.X.
0.1313.30.981617557_atCB981480hypothetical protein LOC100255856-3e-7At1g75110RRA2 (REDUCED RESIDUAL ARABINOSE 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.692.5GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.692.5GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287895Pink soft berry B13 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287892Pink soft berry C11 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.491.3GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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