Co-expression analysis

Gene ID	1622530_at
Gene name	hypothetical protein LOC100249036
Homology with Arabidopsis	Similar to At4g19250: kelch repeat-containing protein (HF=9e-1)
Module size	12 genes
NF	0.40
%ile	58.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.89	1622530_at	BQ800497	hypothetical protein LOC100249036	-	9e-1	At4g19250	kelch repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.92	1619659_s_at	CF405842	pectate lyase PL1-like	-	2e-1	At4g26230	60S ribosomal protein L31 (RPL31B)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.94	1609591_at	CD799271	hypothetical protein LOC100241753	-	1e-3	At3g61900	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.94	1619968_at	CF604378	similar to cysteine protease Cp5	-	3e-2	At3g19400	cysteine proteinase, putative	O.I.	H.G.	S.X.	Please select
0.41	58.7	0.95	1616147_at	CF404954	hypothetical protein LOC100243192	-	2e-6	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.95	1620050_at	CB009432	hypothetical protein LOC100244027	-	1e-5	At5g17500	glycosyl hydrolase family 5 protein / cellulase family protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.95	1620218_at	CF405310	hypothetical protein LOC100262456	-	1e+0	At1g64490	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.92	1612226_at	CB974061	hypothetical protein LOC100259151	-	1e-29	At1g22280	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.94	1606482_at	BQ796112	hypothetical protein LOC100243077	-	3e-10	At3g44830	lecithin:cholesterol acyltransferase family protein / LACT family protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.93	1608623_s_at	CF205543.1	hypothetical protein LOC100257555	-	9e-2	At5g49630	AAP6 (AMINO ACID PERMEASE 6)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.92	1619056_at	CB917774	hypothetical protein LOC100248590	-	2e-5	At1g11570	nuclear transport factor 2 (NTF2), putative	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.95	1618576_at	BQ800615	pectate lyase PL1-like	-	4e-124	At4g13710	pectate lyase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.8	93.4	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.7	93.0	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
2.5	91.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.3	90.7	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.2	89.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.1	89.1	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.1	89.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.1	89.1	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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