Co-expression analysis

Gene ID	1622471_at
Gene name	hypothetical protein LOC100254638
Homology with Arabidopsis	Similar to At5g14470: GHMP kinase-related (HF=5e-1)
Module size	6 genes
NF	0.29
%ile	42.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.93	1622471_at	CB976320	hypothetical protein LOC100254638	-	5e-1	At5g14470	GHMP kinase-related	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.93	1616808_at	CF207742	hypothetical protein LOC100260085	-	6e+0	At1g32370	TOM2B (TOBAMOVIRUS MULTIPLICATION 2B)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.94	1608399_at	CF403467	hypothetical protein LOC100258980	-	5e+0	At5g51451	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.96	1617669_at	CF210717	hypothetical protein LOC100265782	-	2e-34	At4g35230	BSK1 (BR-SIGNALING KINASE 1)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.94	1609370_at	CB972302	hypothetical protein LOC100252511	-	3e-12	At5g65990	amino acid transporter family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.95	1613101_at	CB983076	hypothetical protein LOC100253683	-	3e-69	At3g62120	tRNA synthetase class II (G, H, P and S) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.1	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.3	90.7	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.3	90.7	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.2	89.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.2	89.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.0	88.2	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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