Co-expression analysis

Gene ID	1622468_at
Gene name
Homology with Arabidopsis	Similar to Atcg01120: - (HF=4e-51)
Module size	6 genes
NF	0.24
%ile	33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.90	1622468_at	CF512400	-	-	4e-51	Atcg01120	-	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.93	1608000_at	CF517275	-	-	0	Atcg00270	-	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.94	1612887_at	BQ798901	-	-	7e-5	At3g04890	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.91	1622544_a_at	CD801877	hypothetical protein LOC100259887	-	9e-12	At5g57630	CIPK21 (CBL-interacting protein kinase 21)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.94	1612005_s_at	CB004075	-	-	1e-38	Atcg00440	-	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.92	1609882_s_at	CF201079.1	-	-	1e-72	Atcg00670	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.7	99.0	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.6	97.6	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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