Co-expression analysis

Gene ID 1622456_at
Gene name hypothetical protein LOC100245907 /// hypothetical protein LOC100265993
Homology with ArabidopsisSimilar to At5g65870: ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR) (HF=2e-1)
Module size 19 genes
NF 0.38
%ile 56.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6685.10.911622456_atCF609276hypothetical protein LOC100245907 /// hypothetical protein LOC100265993-2e-1At5g65870ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)O.I.H.G.S.X.
0.5577.30.941615815_atCF207323similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)-5e-23At3g49290ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2)O.I.H.G.S.X.
0.5475.70.931617328_atCF214435hypothetical protein LOC100247950-8e-43At4g36750quinone reductase family proteinO.I.H.G.S.X.
0.5173.20.951620426_atCF515986similar to DNA-binding protein-1e-20At1g13960WRKY4O.I.H.G.S.X.
0.4666.50.951620491_atCD800015hypothetical protein LOC100257942-2e+0At5g56540AGP14 (ARABINOGALACTAN PROTEIN 14)O.I.H.G.S.X.
0.4158.70.941606764_atCB341817hypothetical protein LOC100245034-1e-15At5g62740band 7 family proteinO.I.H.G.S.X.
0.4158.70.941608970_s_atCF206450.1--7e-1At4g02810unknown proteinO.I.H.G.S.X.
0.3446.80.941615915_atCF518741hypothetical protein LOC100267889-4e+0At2g24880self-incompatibility protein-relatedO.I.H.G.S.X.
0.3446.80.951617496_s_atBQ797047hypothetical protein LOC100247953-7e-25At3g12570FYDO.I.H.G.S.X.
0.3345.70.951622786_atCF207035.1hypothetical protein LOC100246765-2e-8At5g61210SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)O.I.H.G.S.X.
0.3141.30.941610068_atCD711769hypothetical protein LOC100252154-2e-19At2g36670aspartyl protease family proteinO.I.H.G.S.X.
0.3039.40.951617261_atCA811086hypothetical protein LOC100242760-6e-1At1g76800nodulin, putativeO.I.H.G.S.X.
0.2937.70.951610454_s_atCF207579hypothetical protein LOC100245034-1e-47At5g62740band 7 family proteinO.I.H.G.S.X.
0.2937.70.951609392_s_atCF210020hypothetical protein LOC100242395-2e-47At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.2837.70.961614977_atCB978594--2e+1At5g17480APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)O.I.H.G.S.X.
0.2734.00.951617882_atCB346978hypothetical protein LOC100265703-1e-19At1g18680HNH endonuclease domain-containing proteinO.I.H.G.S.X.
0.2428.70.971617283_atCF372456hypothetical LOC100245758-4e-20At3g49680BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)O.I.H.G.S.X.
0.2428.70.941616483_atCF517660hypothetical protein LOC100262463-5e+0At5g55650unknown proteinO.I.H.G.S.X.
0.2225.60.961613740_atBM436747hypothetical protein LOC100248677-4e-63At1g34370STOP1 (sensitive to proton rhizotoxicity 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.497.3GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.796.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.796.2GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.696.0GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.696.0GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.495.5GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.395.2GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.194.6GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.194.6GSM299458D_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.491.3GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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