Co-expression analysis

Gene ID 1622450_at
Gene name
Homology with ArabidopsisSimilar to At2g45220: pectinesterase family protein (HF=5e-7)
Module size 16 genes
NF 0.10
%ile 17.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.841622450_atCB970586--5e-7At2g45220pectinesterase family proteinO.I.H.G.S.X.
0.2530.50.951609573_atCB973015hypothetical protein LOC100264499-1e+0At3g50450HR1 (HOMOLOG OF RPW8 1)O.I.H.G.S.X.
0.2225.60.961615266_atCF372926hypothetical protein LOC100246796-1e-14At5g24930zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.2124.00.941613538_atCB969057hypothetical protein LOC100243093-6e-6At4g00400GPAT8 (glycerol-3-phosphate acyltransferase 8)O.I.H.G.S.X.
0.1718.20.951611186_atCF604554hypothetical protein LOC100244119-1e+0At2g39520unknown proteinO.I.H.G.S.X.
0.1616.70.951607952_atCF372631hypothetical protein LOC100250523-3e-8At1g28440HSL1 (HAESA-Like 1)O.I.H.G.S.X.
0.1515.60.961610659_atBQ796183hypothetical protein LOC100243705-1e+0At4g28840unknown proteinO.I.H.G.S.X.
0.1414.40.961619736_atCF210461hypothetical protein LOC100241098-3e-30At5g04460protein binding / zinc ion bindingO.I.H.G.S.X.
0.1212.10.941617495_atCB973304hypothetical protein LOC100264342-5e-3At3g30390amino acid transporter family proteinO.I.H.G.S.X.
0.1111.30.911619883_atCD801259hypothetical protein LOC100248575-8e-1At4g33690unknown proteinO.I.H.G.S.X.
0.099.40.961606809_atCF207836hypothetical protein LOC100250094-7e-5At5g60750CAAX amino terminal protease family proteinO.I.H.G.S.X.
0.066.80.951615362_s_atBQ799459hypothetical protein LOC100260441-3e-27At4g01370ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4)O.I.H.G.S.X.
0.066.80.921608841_atCB922260hypothetical protein LOC100242500-2e+0At4g01670unknown proteinO.I.H.G.S.X.
0.045.20.891607067_atCD718614hypothetical protein LOC100241330-3e-1At2g46160zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.034.20.941612205_s_atBQ792162hypothetical protein LOC100243555-1e-13At3g03890FMN bindingO.I.H.G.S.X.
0.034.20.911609757_s_atCF517381hypothetical protein LOC100244902-1e-8At5g20700senescence-associated protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.2GSM436392V. riparia (VR, PI588259) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM299462D_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM436426V. riparia (VR, PI588259) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.390.7GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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