Co-expression analysis

Gene ID 1622435_at
Gene name hypothetical protein LOC100249381
Homology with ArabidopsisSimilar to At1g32130: - (HF=1e-13)
Module size 6 genes
NF 0.32
%ile 46.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5072.70.971622435_atCF206114.1hypothetical protein LOC100249381-1e-13At1g32130-O.I.H.G.S.X.
0.6081.90.981608210_atCF212773hypothetical protein LOC100259736-1e-44At1g70600structural constituent of ribosomeO.I.H.G.S.X.
0.4464.10.981622640_atCB981128hypothetical protein LOC100260398-6e-2At3g01170structural constituent of ribosomeO.I.H.G.S.X.
0.3141.30.981616141_atCB345889hypothetical protein LOC100258923-3e-48At3g05000transport protein particle (TRAPP) component Bet3 family proteinO.I.H.G.S.X.
0.1920.90.981606974_atCF405412hypothetical protein LOC100255884-4e-11At2g23310ATRER1C1O.I.H.G.S.X.
0.1819.40.981609017_s_atCA809548hypothetical protein LOC100262493-1e-6At3g14430unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.0GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.194.6GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.993.8GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.993.8GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.893.4GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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