Co-expression analysis

Gene ID	1622435_at
Gene name	hypothetical protein LOC100249381
Homology with Arabidopsis	Similar to At1g32130: - (HF=1e-13)
Module size	6 genes
NF	0.32
%ile	46.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.97	1622435_at	CF206114.1	hypothetical protein LOC100249381	-	1e-13	At1g32130	-	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1608210_at	CF212773	hypothetical protein LOC100259736	-	1e-44	At1g70600	structural constituent of ribosome	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1622640_at	CB981128	hypothetical protein LOC100260398	-	6e-2	At3g01170	structural constituent of ribosome	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.98	1616141_at	CB345889	hypothetical protein LOC100258923	-	3e-48	At3g05000	transport protein particle (TRAPP) component Bet3 family protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.98	1606974_at	CF405412	hypothetical protein LOC100255884	-	4e-11	At2g23310	ATRER1C1	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.98	1609017_s_at	CA809548	hypothetical protein LOC100262493	-	1e-6	At3g14430	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.1	94.6	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.9	93.8	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.9	93.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.9	93.8	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.8	93.4	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.4	91.3	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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