Co-expression analysis

Gene ID	1622423_at
Gene name	similar to Bifunctional nitrilase/nitrile hydratase NIT4B
Homology with Arabidopsis	Similar to At5g22300: NIT4 (NITRILASE 4) (HF=1e-13)
Module size	6 genes
NF	0.52
%ile	77.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1622423_at	CB342360	similar to Bifunctional nitrilase/nitrile hydratase NIT4B	-	1e-13	At5g22300	NIT4 (NITRILASE 4)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1614373_at	CD802363	hypothetical protein LOC100249178	-	2e-5	At2g25605	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1617949_at	CF213069	hypothetical protein LOC100241470	-	1e-3	At3g09735	DNA-binding S1FA family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1615857_s_at	BQ797394	hypothetical protein LOC100267827	-	2e-53	At1g01820	PEX11C (PEROXIN 11C)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.97	1614796_at	CF609955	hypothetical protein LOC100250729	-	4e-19	At1g42960	-	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1615820_at	BQ796436	hypothetical protein LOC100263593	-	1e-6	At3g07270	GTP cyclohydrolase I	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	96.6	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.6	96.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
3.1	94.6	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.0	94.2	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.8	93.4	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.7	93.0	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.6	92.5	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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