Co-expression analysis

Gene ID 1622413_at
Gene name
Homology with ArabidopsisSimilar to At4g39070: zinc finger (B-box type) family protein (HF=3e-1)
Module size 16 genes
NF 0.40
%ile 58.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.941622413_atCD714494--3e-1At4g39070zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.5375.20.971621374_atCF371661hypothetical protein LOC100250669-2e-6At3g51820G4O.I.H.G.S.X.
0.4464.10.961614439_atCF213916--3e-55At1g48520GATB (GLU-ADT SUBUNIT B)O.I.H.G.S.X.
0.4464.10.961613539_atCF517419hypothetical protein LOC100247624-1e-9At5g03940CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT)O.I.H.G.S.X.
0.4361.50.971620024_s_atCF511252hypothetical protein LOC100245587-4e-9At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedO.I.H.G.S.X.
0.4361.50.971607912_atCD800716hypothetical protein LOC100241124-2e-11At5g05980ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B)O.I.H.G.S.X.
0.4361.50.941614270_atCD010750--3e-20At3g07670SET domain-containing proteinO.I.H.G.S.X.
0.4158.70.961622747_atCF210672hypothetical protein LOC100254207-3e-18At5g52440HCF106O.I.H.G.S.X.
0.4057.70.971620735_atCA809248hypothetical protein LOC100264528-3e-9At1g56000amine oxidase-relatedO.I.H.G.S.X.
0.3446.80.971617630_atCF514753hypothetical protein LOC100251032-3e-10At3g52750FTSZ2-2O.I.H.G.S.X.
0.3345.70.971622302_s_atCF207602hypothetical protein LOC100245459-2e-19At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)O.I.H.G.S.X.
0.3243.10.971621895_atCA816130hypothetical protein LOC100248517-7e-37At2g18710SCY1 (SecY Homolog 1)O.I.H.G.S.X.
0.3141.30.971609160_atCF215744hypothetical protein LOC100257877-2e-28At5g47110lil3 protein, putativeO.I.H.G.S.X.
0.2734.00.961613447_s_atCA814567chlorophyll a/b binding protein-1e-4At1g61520LHCA3O.I.H.G.S.X.
0.2428.70.961614784_s_atCB968637chlorophyll a/b binding protein-3e-46At1g61520LHCA3O.I.H.G.S.X.
0.2327.50.971615706_atCA816068hypothetical protein LOC100257450-1e-4At1g44920unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.0GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.595.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.395.2GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.893.4GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.793.0GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.692.5GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.591.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.591.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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