Co-expression analysis

Gene ID 1622407_at
Gene name hypothetical protein LOC100254632
Homology with ArabidopsisSimilar to At3g10020: unknown protein (HF=3e-4)
Module size 10 genes
NF 0.49
%ile 73.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.60.731622407_atCF518919hypothetical protein LOC100254632-3e-4At3g10020unknown proteinO.I.H.G.S.X.
0.6384.30.901621709_atCF518506hypothetical protein LOC100252916-1e-7At2g32120HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2)O.I.H.G.S.X.
0.5779.80.851621652_atCF518056hypothetical protein LOC100262206-6e-9At5g59720HSP18.2 (heat shock protein 18.2)O.I.H.G.S.X.
0.5779.80.881611272_atCB914650hypothetical protein LOC100246645-2e-1At3g23637DVL21 (DEVIL 21)O.I.H.G.S.X.
0.4868.80.831620960_a_atCF515315hypothetical protein LOC100253085 /// hypothetical protein LOC100263355-6e-3At3g46230ATHSP17.4O.I.H.G.S.X.
0.4666.50.721609222_atCF518991hypothetical protein LOC100263588-5e-9At4g10250ATHSP22.0O.I.H.G.S.X.
0.4666.50.901621592_s_atBQ792954dehydrin-2e-3At2g21490LEA (DEHYDRIN LEA)O.I.H.G.S.X.
0.4361.50.901614788_atBQ792954dehydrin-2e-3At2g21490LEA (DEHYDRIN LEA)O.I.H.G.S.X.
0.4260.10.831619147_atBQ796918hypothetical protein LOC100240909-2e-2At1g32370TOM2B (TOBAMOVIRUS MULTIPLICATION 2B)O.I.H.G.S.X.
0.2327.50.831612094_atCF513922heat shock protein 101-1e-50At1g74310ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.397.2GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.796.2GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM287895Pink soft berry B13 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage