Co-expression analysis

Gene ID 1622393_at
Gene name proline rich protein 1
Homology with ArabidopsisSimilar to At5g67460: glycosyl hydrolase family protein 17 (HF=1e+0)
Module size 6 genes
NF 0.81
%ile 98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971622393_atCF373123proline rich protein 1-1e+0At5g67460glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.8394.60.971618487_atCF403542--1e+0At3g01980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.7792.30.971616000_atCF215116hypothetical protein LOC100257299-2e-1At4g35025unknown proteinO.I.H.G.S.X.
0.6787.90.971607467_atCD800366hypothetical protein LOC100257154-4e+0At3g03800SYP131 (SYNTAXIN OF PLANTS 131)O.I.H.G.S.X.
0.6787.90.981611598_atCB970208hypothetical protein LOC100244034-7e+0At5g38630ACYB-1O.I.H.G.S.X.
0.6183.20.971611976_atCF213700hypothetical protein LOC100260879-4e-1At2g20362unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.390.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.390.7GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2Link to GEO
2.390.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.189.1GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.088.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.088.2GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
1.987.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.987.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.4398.1.S1_at, orthologous to the query gene, 1622393_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.4398.1.S1_atAt5g67460--8e-9At4g29360glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.6077.8Zm.17323.1.S1_atAt5g67460protein binding protein-3e-1At1g76820GTP binding / GTPaseO.I.H.G.S.X.
0.4048.5Zm.11980.1.A1_atAt5g67460--4e-1At5g27090AGL54O.I.H.G.S.X.
0.2928.1Zm.19160.1.S1_atAt5g67460thioredoxin-like protein 1-6e-7At3g04780-O.I.H.G.S.X.
0.2115.5ZmAffx.1298.1.S1_atAt5g67460--0Atmg00730-O.I.H.G.S.X.
0.1912.8Zm.7464.1.A1_atAt5g67460phosphatidylinositol-4-phosphate 5-kinase 9-2e-4At1g777401-phosphatidylinositol-4-phosphate 5-kinase, putative / PIP kinase, putative / PtdIns(4)P-5-kinase, putative / diphosphoinositide kinase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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