Co-expression analysis

Gene ID 1622393_at
Gene name proline rich protein 1
Homology with ArabidopsisSimilar to At5g67460: glycosyl hydrolase family protein 17 (HF=1e+0)
Module size 6 genes
NF 0.81
%ile 98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971622393_atCF373123proline rich protein 1-1e+0At5g67460glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.8394.60.971618487_atCF403542--1e+0At3g01980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.7792.30.971616000_atCF215116hypothetical protein LOC100257299-2e-1At4g35025unknown proteinO.I.H.G.S.X.
0.6787.90.971607467_atCD800366hypothetical protein LOC100257154-4e+0At3g03800SYP131 (SYNTAXIN OF PLANTS 131)O.I.H.G.S.X.
0.6787.90.981611598_atCB970208hypothetical protein LOC100244034-7e+0At5g38630ACYB-1O.I.H.G.S.X.
0.6183.20.971611976_atCF213700hypothetical protein LOC100260879-4e-1At2g20362unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.390.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.390.7GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2Link to GEO
2.390.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.189.1GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.088.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.088.2GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
1.987.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.987.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.112956.1.S1_at, orthologous to the query gene, 1622393_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7790.8TaAffx.112956.1.S1_atAt5g67460--4e+0At3g42990unknown proteinO.I.H.G.S.X.
0.6583.9TaAffx.14645.2.S1_atAt5g67460--9e-1At3g32100unknown proteinO.I.H.G.S.X.
0.6081.0TaAffx.6412.1.S1_atAt5g67460--2e+1At4g17695KAN3 (KANADI 3)O.I.H.G.S.X.
0.5779.2TaAffx.55771.1.S1_atAt5g67460--1e+1At3g17350unknown proteinO.I.H.G.S.X.
0.4869.0TaAffx.120246.1.A1_atAt5g67460--1e+0At1g53030cytochrome c oxidase copper chaperone family proteinO.I.H.G.S.X.
0.4464.5TaAffx.23406.1.S1_atAt5g67460--9e-4At3g53610ATRAB8O.I.H.G.S.X.
0.4362.2TaAffx.28550.1.S1_atAt5g67460--2e-11At2g18020EMB2296 (embryo defective 2296)O.I.H.G.S.X.
0.4362.2RPTR-Ta-L36849-1_atAt5g67460--O.I.H.G.S.X.
0.4362.2TaAffx.78875.1.S1_atAt5g67460--3e+0At3g57250emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.3244.4TaAffx.51916.1.S1_atAt5g67460--3e+0At4g26010peroxidase, putativeO.I.H.G.S.X.
0.3244.4Ta.16985.2.S1_atAt5g67460--4e+0At4g16141sequence-specific DNA binding / transcription factor/ zinc ion bindingO.I.H.G.S.X.
0.3040.9Ta.5052.3.S1_atAt5g67460--3e-1At1g06240unknown proteinO.I.H.G.S.X.
0.3040.9Ta.6916.3.A1_atAt5g67460--4e+0At4g22460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2633.6TaAffx.111658.1.S1_s_atAt5g67460--2e+1At1g72175zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2532.1TaAffx.78397.1.S1_atAt5g67460--2e+1At1g74900OTP43 (organelle transcript processing defect 43)O.I.H.G.S.X.
0.2329.0Ta.28524.2.S1_atAt5g67460Beta-1,3-glucanase-4e+0At5g65330AGL78 (AGAMOUS-LIKE 78)O.I.H.G.S.X.
0.2329.0Ta.9024.3.S1_atAt5g67460--5e-12At2g20650zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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