Co-expression analysis

Gene ID 1622393_at
Gene name proline rich protein 1
Homology with ArabidopsisSimilar to At5g67460: glycosyl hydrolase family protein 17 (HF=1e+0)
Module size 6 genes
NF 0.81
%ile 98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971622393_atCF373123proline rich protein 1-1e+0At5g67460glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.8394.60.971618487_atCF403542--1e+0At3g01980short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.7792.30.971616000_atCF215116hypothetical protein LOC100257299-2e-1At4g35025unknown proteinO.I.H.G.S.X.
0.6787.90.971607467_atCD800366hypothetical protein LOC100257154-4e+0At3g03800SYP131 (SYNTAXIN OF PLANTS 131)O.I.H.G.S.X.
0.6787.90.981611598_atCB970208hypothetical protein LOC100244034-7e+0At5g38630ACYB-1O.I.H.G.S.X.
0.6183.20.971611976_atCF213700hypothetical protein LOC100260879-4e-1At2g20362unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.390.7GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.390.7GSM147673Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation2Link to GEO
2.390.7GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.189.1GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.088.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.088.2GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
1.987.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.987.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.209198.1.S1_at, orthologous to the query gene, 1622393_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7694.3PtpAffx.209198.1.S1_atAt5g67460hypothetical protein-2e-3At1g79480-O.I.H.G.S.X.
0.3661.6PtpAffx.214236.1.S1_atAt5g67460hypothetical protein-2e-20At5g25110CIPK25 (CBL-INTERACTING PROTEIN KINASE 25)O.I.H.G.S.X.
0.2441.8PtpAffx.119155.1.A1_atAt5g67460hypothetical protein-4e-2At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.
0.2340.5PtpAffx.202481.1.S1_s_atAt5g67460hypothetical protein-8e-2At2g32990AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8)O.I.H.G.S.X.
0.2136.5PtpAffx.200069.1.S1_s_atAt5g67460hypothetical protein-1e-1At1g52470hydrolaseO.I.H.G.S.X.
0.2136.5PtpAffx.205451.1.S1_atAt5g67460--2e+0At4g33600unknown proteinO.I.H.G.S.X.
0.1729.1PtpAffx.215847.1.S1_atAt5g67460hypothetical protein-3e-1At5g20100unknown proteinO.I.H.G.S.X.
0.1525.3PtpAffx.223243.1.S1_atAt5g67460hypothetical protein-1e+0At5g49280hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1423.5PtpAffx.20153.3.S1_atAt5g67460hypothetical protein-1e-18At2g44530ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putativeO.I.H.G.S.X.
0.1423.5PtpAffx.63355.1.S1_atAt5g67460--6e-1At3g43180zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1321.6PtpAffx.219174.1.S1_atAt5g67460hypothetical protein-2e+0At1g44608unknown proteinO.I.H.G.S.X.
0.1219.6PtpAffx.157708.1.S1_atAt5g67460hypothetical protein-5e+0At5g41992CPuORF58 (Conserved peptide upstream open reading frame 58)O.I.H.G.S.X.
0.1118.1PtpAffx.209450.1.S1_atAt5g67460--1e+0At4g20410GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)O.I.H.G.S.X.
0.1118.1PtpAffx.213936.1.S1_atAt5g67460hypothetical protein-4e+0At4g39560kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.0914.6PtpAffx.75542.1.A1_atAt5g67460--1e-1At2g18940pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.0914.6PtpAffx.221787.1.S1_atAt5g67460hypothetical protein-6e-1At2g1045014-3-3 protein, putative / grf15, putativeO.I.H.G.S.X.
0.0711.6PtpAffx.220312.1.S1_atAt5g67460hypothetical protein-4e-2At5g51545LPA2 (low psii accumulation2)O.I.H.G.S.X.
0.0711.6PtpAffx.22417.2.S1_atAt5g67460hypothetical protein-5e+0At5g44450methyltransferaseO.I.H.G.S.X.
0.035.2PtpAffx.55455.1.S1_a_atAt5g67460beta-ketoacyl-coa synthase family protein /// beta-ketoacyl-coa synthase family protein-4e-12At1g04220KCS2 (3-KETOACYL-COA SYNTHASE 2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Zea_mays



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