Co-expression analysis

Gene ID	1622364_at
Gene name
Homology with Arabidopsis	Similar to At5g62750: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.74
%ile	96.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.96	1622364_at	CF606509	-	-	2e+0	At5g62750	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.96	1609422_a_at	CA816734	-	-	2e-12	Atcg00050	-	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1618379_s_at	CB343512	-	-	1e+0	At3g49115	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.96	1617605_at	CF513977	-	-	0	Atcg00680	-	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.96	1622410_s_at	CB344360	-	-	5e-9	Atcg00050	-	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.96	1622744_at	CF201679.1	similar to Os01g0789500 /// similar to ribosomal protein S3	-	2e-42	Atcg00820	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.3	95.2	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.0	94.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.2	89.9	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.1	89.1	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.9	87.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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