Co-expression analysis

Gene ID 1622347_at
Gene name
Homology with ArabidopsisSimilar to At1g06620: 2-oxoglutarate-dependent dioxygenase, putative (HF=9e-8)
Module size 16 genes
NF 0.44
%ile 66.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.921622347_atCD721503--9e-8At1g066202-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.6283.30.961612576_atCF209978hypothetical protein LOC100242562-4e-2At1g47720OSB1 (Organellar Single-stranded)O.I.H.G.S.X.
0.6081.90.961614308_atCF211114hypothetical protein LOC100265443-2e-37At5g48470unknown proteinO.I.H.G.S.X.
0.5779.80.941609396_atCF210676hypothetical protein LOC100249947-3e-10At2g32180PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE 18)O.I.H.G.S.X.
0.4767.70.961617670_atCF211965hypothetical protein LOC100260576-8e-90At2g21170TIM (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.4464.10.951611466_atCF372402hypothetical protein LOC100253536-7e-26At4g19100unknown proteinO.I.H.G.S.X.
0.4361.50.951607464_atCF516938hypothetical protein LOC100253507-3e-30At5g35220EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1)O.I.H.G.S.X.
0.4361.50.961618846_atCD011927hypothetical protein LOC100258439-2e-15At3g45050unknown proteinO.I.H.G.S.X.
0.4361.50.941612553_atCF514076hypothetical protein LOC100255895-4e-36At5g14260SET domain-containing proteinO.I.H.G.S.X.
0.4158.70.951620738_atCD711276hypothetical protein LOC100247142-1e-4At4g08280-O.I.H.G.S.X.
0.3954.90.961613696_atCA817501hypothetical protein LOC100242891-1e+0At2g25720unknown proteinO.I.H.G.S.X.
0.3853.60.941620736_a_atCD714912hypothetical protein LOC100255654-3e-39At1g11430plastid developmental protein DAG, putativeO.I.H.G.S.X.
0.3751.70.951616809_atCD801686hypothetical protein LOC100253004-2e-6At3g19800unknown proteinO.I.H.G.S.X.
0.2937.70.951616148_atBQ800532hypothetical protein LOC100255531-1e+0At1g58480-O.I.H.G.S.X.
0.2734.00.951620303_atCB981867hypothetical protein LOC100242724-4e-6At3g18420tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.1920.90.971621474_atCF372414hypothetical protein LOC100251060-6e-26At5g26742emb1138 (embryo defective 1138)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.289.9GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.189.1GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147732Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation61Link to GEO
1.987.2GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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